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scnpilot_expt_750_bf_scaffold_1543_16

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_69_7_fragment

partial RP 6 / 55 BSCG 8 / 51 MC: 2 ASCG 4 / 38
Location: comp(15962..16759)

Top 3 Functional Annotations

Value Algorithm Source
Putative transporter, formate/nitrite transporter family n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HWS3_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 277.0
  • Bit_score: 268
  • Evalue 8.70e-69
Membrane protein {ECO:0000313|EMBL:KJJ94829.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 287.0
  • Bit_score: 269
  • Evalue 5.50e-69
formate/nitrite transporter family protein similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 287.0
  • Bit_score: 259
  • Evalue 8.70e-67

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Taxonomy

Pseudomonas sp. 21 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGACCAAGCCACCCTCCGAAACCCCGGACAAGCGTCCCTCCGGAACCGCGAACACGGCGGCCGGCGATGGCTTTGCGCTCTCGCGCGAGGAGAAGGACGAGGTCGAGAAAAAGCGGCCGCCCCGCGCTGCGGTCCTGCACGAGATCATCCGCAGCAACGGCGAGGAGGAACTCAAGCGCACTGTCCCGGCGCTGGCCTGGTCGTCGCTTGCCGCGGGGCTGTCGATGGGTTTCTCGATGCTGGCGCGCGGCGTGCTGCATCGTCACCTGGGGCTGTTCACCGAGAACATCATGACCGCCGTGCTGCCGGTAATGACCGAGCCGGGCCTGAAGAACTTCCGCCGTTTCCTCAGGCTCTGGTCGGTAGTGCTGGCAGGGAACCTTGTCGGTGTCACGCTGTTCGCGTTCGGGCTGCTGCACCTGCAGCAGTTCGATGCCGCCACGCAGAAAGCGTTCGTCGAGATCGGCGAGGAGCTGATGCGCAATTCGCCCTGGCAGATGTTCACCAAGGGCATCCTGGCCGGCTGGCTGATATCGATGATGGTGTGGATGCTGGCCGCCAGCGAACGGTCCCGCTTCATCGTGATCGTGGTAACCACGTATGTCATCGCCATCGGCGGGTTCACCCACGCCATCGTGGGATCGGTCGAGGCCATGTACCTGGTGTTCGCCGGCGGGCTCGACTTCCTCGATTGCGTCACCGGTTTCGCACTGCCCACGCTGGCCGGCAACATCGTGGGCGGCAGCCTCATCTTCGCCCTGATCAGCCACGCCCAGGTGCGCAGTGACGGTGATTGA
PROTEIN sequence
Length: 266
MTKPPSETPDKRPSGTANTAAGDGFALSREEKDEVEKKRPPRAAVLHEIIRSNGEEELKRTVPALAWSSLAAGLSMGFSMLARGVLHRHLGLFTENIMTAVLPVMTEPGLKNFRRFLRLWSVVLAGNLVGVTLFAFGLLHLQQFDAATQKAFVEIGEELMRNSPWQMFTKGILAGWLISMMVWMLAASERSRFIVIVVTTYVIAIGGFTHAIVGSVEAMYLVFAGGLDFLDCVTGFALPTLAGNIVGGSLIFALISHAQVRSDGD*