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scnpilot_expt_750_bf_scaffold_1543_25

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_69_7_fragment

partial RP 6 / 55 BSCG 8 / 51 MC: 2 ASCG 4 / 38
Location: 25267..26064

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIC8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 271.0
  • Bit_score: 325
  • Evalue 6.00e-86
type IV pilus biogenesis/stability protein PilW Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 271.0
  • Bit_score: 330
  • Evalue 2.00e-87
type IV pilus biogenesis/stability protein PilW similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 271.0
  • Bit_score: 322
  • Evalue 8.40e-86

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGCGCTCTGAGCCGCTGCTGGTGGTCGTCCTGTCGCTGGCCCTGGGCGGCTGCGTGACGGTAGGCGGCGGGGATGGCAACAGCAACAACGGCAGCAGCGCGGGGCAGCCGCCCGGTGCGAACATCACCGCGAGCAGCAAGGCCGACCAGCGCAAGGATGCCGCGCGCGTCCATACCGAGCTGGCCCAGCACCATTTCCTGACCAAGTTGCAGCTTGCGCTGAAGTTCGACCCGGACTACGCACCCGCCCATACCATGATCGCGGTGGTCTACGAGCGCATCAACAACCAGACCGAAGCGGAGCAGCACTACCGCAAGGCGGTGGCGCTGGAGCCGGCCAAGGGCGCCCCGAACAACAACCTCGGACAGTTCCTGTGCCGCACCGGCAGGGCGCAGGAATCCCTGGCCTACTTCCGCAAGGCGGTGGCCGATCCGTTCTACGCCACCCCCGACGTGGCGTTCACGAATGCCGGCATCTGCCAGTTGCAGATGAGCGATACGGCCGGCGCGGAAGCGAGTTTTCGTGACGCAATCGCGCGAAATCCCGGCAACGGGGATGCACTTTTCCATCTTGCCGAAGTACTCTACCGGCAGGGGGATGCGTTTCGTGCTCGGGCATTCATCCAGCGCTTCGACGCGCTGGGCAAACCCAATGCGGCCGCTCTCAAGCTTGGTTATGATGTCGAGTCGCGCTTGGGCAACACGGACGCAGCCCAGACCTATCTCAGGCGTTTGCAGAGCCAGTTCCCGGACTCGGAGCAGGCCCGCGCCCTGAAAACCACTGCCAGCAGTCAATGA
PROTEIN sequence
Length: 266
MRSEPLLVVVLSLALGGCVTVGGGDGNSNNGSSAGQPPGANITASSKADQRKDAARVHTELAQHHFLTKLQLALKFDPDYAPAHTMIAVVYERINNQTEAEQHYRKAVALEPAKGAPNNNLGQFLCRTGRAQESLAYFRKAVADPFYATPDVAFTNAGICQLQMSDTAGAEASFRDAIARNPGNGDALFHLAEVLYRQGDAFRARAFIQRFDALGKPNAAALKLGYDVESRLGNTDAAQTYLRRLQSQFPDSEQARALKTTASSQ*