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scnpilot_expt_750_bf_scaffold_2828_9

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_69_7_fragment

partial RP 6 / 55 BSCG 8 / 51 MC: 2 ASCG 4 / 38
Location: comp(10439..11023)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSL2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 187.0
  • Bit_score: 356
  • Evalue 2.30e-95
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 187.0
  • Bit_score: 356
  • Evalue 3.20e-95
SSU ribosomal protein S1P similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 187.0
  • Bit_score: 352
  • Evalue 7.20e-95

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGAAGAGCGTCGCCGCATTTCGCTTCAAGTCGATCACCGATTTCGGCGTGTTCATCGGCCTGGAAGGCGGCATCGACGGCCTGGTGCACCTGTCCGACATCTCGTGGCAGGTGTCCGGCGAAGACCTCGTGCGCGACTTCAAGAAGGGCGAGGAGATCGAGGCGGTGGTGCTGGCCGTCGACCCGGAGCGCGAGCGCATCAGCCTCGGGATCAAGCAGATGGAGCAGGATCCGTTCGGCCAGTTCATGGCGGCCAACCCGCGTGGCACGATCGTCAACGGCACGGTCAAGGAAGTCGACGCCAAGGGTGCCGTGATCGACCTGGGCGAGGGCGTGGAGGGTTACCTGCGCGCCAACGACATAGCCAAGGAGCGCATCGACGACGCTACCCAGCACCTGAAGGTGGGCGACAAGGTCGAGGCCAAGTTCACCGGCATGGATCGCAAGGGTCGCCAGCTGGCGCTCTCGATTCGCGCCAAGGACGAGGAAGACGCCCCCGAAGCCGCGGTCGACTACTCTTCGGCCGCCAGTGGCACGACCAAGCTCGGCGCGTTGTTGAAGGAACAGTTCAACAAGGCCGACTGA
PROTEIN sequence
Length: 195
MKSVAAFRFKSITDFGVFIGLEGGIDGLVHLSDISWQVSGEDLVRDFKKGEEIEAVVLAVDPERERISLGIKQMEQDPFGQFMAANPRGTIVNGTVKEVDAKGAVIDLGEGVEGYLRANDIAKERIDDATQHLKVGDKVEAKFTGMDRKGRQLALSIRAKDEEDAPEAAVDYSSAASGTTKLGALLKEQFNKAD*