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scnpilot_expt_750_bf_scaffold_2894_6

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_69_7_fragment

partial RP 6 / 55 BSCG 8 / 51 MC: 2 ASCG 4 / 38
Location: comp(6602..7429)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 269.0
  • Bit_score: 425
  • Evalue 8.10e-116
Shikimate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 269.0
  • Bit_score: 425
  • Evalue 5.80e-116
shikimate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 269.0
  • Bit_score: 421
  • Evalue 1.80e-115

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAGCCAGCCATCCCAGTTCGCCGTGTTCGGCCATCCGGTCGCGCACTCGCTGTCGCCGCGCATCCACCAGGCCTTCGCGCAGCAGTCCGGCATCGCGCTGGAGTACCGCGCCATCGACGCGACGCCGGAGGCGTTCGCCGCCGCGGTGCGCGGGTTCTTCGCCGCGGGCGGCGCGGGCGCGAACGTCACGCTGCCGCACAAGGGCGCCGCGTTCGCGCTGGCGGACGAACGCAGCGAGGCGGCCACGCGCGCCGGCAGCGCGAACGTGCTCTCCCCCCTGCCCGGTGGTCGGCTCGCCGCGCACAACACCGACGGCGCCGGCCTGCTGCGCGACCTCACCGAGCGCCACGGCGCCGACCTGCGCGGTCGCGATGCCTTGCTGCTGGGTGCCGGCGGCGCGGCGCGCAGCGCAGCCTGGGCGCTGCTGGATGCGGGCGTGGAGACGCTGACCATCGTCAACCGCACGCCGGAAACCGCCGACGCGCTGGCCGACGCGATCGGCGAACCCGCCCGCGTGCACACGCGCTACTGGGACGATCTTGCGAACCTCGGCAGTTACGACCTCATCCTCAACGCAACGTCGGCCGGGGTGCTGGGCGGCGGACTGAACCTGCCGATGTCGCTGGTGGGCGCGCGCGCGTCCTGCTACGACCTGGCCTATGGCGCCGCGGCGGTCGGCTTCATCGCCTGGGCGACGGCCGCGGGCGCGCGCCATGCGTGGGACGGGCTGGGCATGCTGGTGGAGCAGGCGGCCGAGGCGTTCGCGCTGTGGCACGGCACGCGCCCCGACACCGAGCCGGTGTACCAGGCGCTGCGCGCCGGCTGA
PROTEIN sequence
Length: 276
MSQPSQFAVFGHPVAHSLSPRIHQAFAQQSGIALEYRAIDATPEAFAAAVRGFFAAGGAGANVTLPHKGAAFALADERSEAATRAGSANVLSPLPGGRLAAHNTDGAGLLRDLTERHGADLRGRDALLLGAGGAARSAAWALLDAGVETLTIVNRTPETADALADAIGEPARVHTRYWDDLANLGSYDLILNATSAGVLGGGLNLPMSLVGARASCYDLAYGAAAVGFIAWATAAGARHAWDGLGMLVEQAAEAFALWHGTRPDTEPVYQALRAG*