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scnpilot_p_inoc_scaffold_715_6

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(5060..5371)

Top 3 Functional Annotations

Value Algorithm Source
Excinuclease ABC C subunit domain protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EXT6_SPHCR similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 102.0
  • Bit_score: 161
  • Evalue 3.40e-37
putative endonuclease similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 103.0
  • Bit_score: 180
  • Evalue 3.40e-43
Putative endonuclease {ECO:0000313|EMBL:AJA09292.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fri similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 103.0
  • Bit_score: 180
  • Evalue 1.70e-42

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGCCGCGCGATCTCAGCCCCACAGTCTACCTGCTCTGTTCACGCAGGAACGGCACGCTCTACACAGGCGTGACTTCAGACCTCGTGCAACGCATCCATCAACATCGCGAAGGGCTAATCCCCGGTTTCACCCTTGAATATGGCGTCAAACGCCTCGTCTGGTTTGAACAGCACGCAACCATGGAACTGGCAATCCAGCGCGAAAAGCGGATCAAGAAATGGAATCGGGCGTGGAAATTGGAACTGATCGAGAAGGATAATCCTGACTGGAATGATCTCGCCGAGGATTTGGGCTTTCCTCCGCTCGGGTGA
PROTEIN sequence
Length: 104
MPRDLSPTVYLLCSRRNGTLYTGVTSDLVQRIHQHREGLIPGFTLEYGVKRLVWFEQHATMELAIQREKRIKKWNRAWKLELIEKDNPDWNDLAEDLGFPPLG*