ggKbase home page

scnpilot_p_inoc_scaffold_909_4

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(2286..4754)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 822.0
  • Bit_score: 931
  • Evalue 7.40e-268
  • rbh
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 822.0
  • Bit_score: 931
  • Evalue 2.10e-268
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK67539.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 822.0
  • Bit_score: 931
  • Evalue 1.00e-267

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2469
ATGACCAAAAGGTTTTTCCTGAATGTTTCGGCTATGGCGGTGCTGGTGGCAGCCCCGCTTGGCGTGGCCCGCGCTGCGGATGAGGCGGGAGGCTCGCCTTCCGATCAGGGCGGCGGCATTACCGATATCGTCGTGACTGCGCAGCATGTGGAGGAAAGCGCCCAGCGCGCGGCCATTGCCATCAATGTGGTCAGCGGCGACGAATTGGTCCGTCAGGCGGTGAGCCGGCCGGAAGATCTTTCCAAGATCGTTCCCGCGCTGTCGATCACCAACAATGGCGGGCCCTATTCGGTGTTCTTCGTTCGCGGGGTCGGCAATTCCACGCTCAATGCCTATTCCGATCCGGGCATCGCGTTCAATTATGACGGGGTCTATATCGGTCGCCCTTCTTCCACGAGCGGCACTTTCTACGATCTGGAGCGGGTTGAAGTTTTGAAGGGGCCGCAAGGCACCCTGTATGGACGCAATGCCACCGGCGGCGCGATCAATGTGATACCTCGCCGCCCGAAGATCGGTGAGACTTCGGCCGAGTTGATCGCCAGCTATGGAAATTACAATGCGCTGAGCGCGCAGGGCGCGGTCAATCTGGGCGTCAGCGATTCCGCGGCTGTGCGCGTGTCGGGCAATTATGTCAGCCACGATCCCTATATGGATGACGGCACCGGCGATCTCGACGAGTTTGGCCTGAGAGCGCAGCTCGCGCTCGAGCTTTCGCCCGGCGCCGATCTGCGCATTGCGGCGGATTATGCGCATCAGGGCGGTGTGGGCTCGTTTTCGACCTATCTGGGCGATGCCACGCCCAATTTCGGCATGTCCGGCTTTACCGGCTACACATTCAACCCCACGGATTTCGGCCCCAAGAACGGCATTCTCAGCCCGGAATCGCAGGCATGGGCCGGGTCGCTGTTCGTTCGCCAAGCCGGCCGTGCCGGGCGCTTCACCAGCGGAGTGCCGTATAATGACAATGATTACTGGGGTGTCAGCGCGGAGCTGAATGTCGATATCGGCGACGGCACCCTGAGTGTCCTGCCTGCCTATCGCGAGGCGGATCTCGACAATCTCTTCACTGCCGGGATGAACGGGGCCAAGACGCGCGAGAAAGACAAGCAGACCAGCCTTGAAGTCCGCTATGCCGGCAATATCGGCGACAAGGCCGATATCGTGGTGGGCGGCTATTATTTCGGCGAGCGGATCAAGACCAACACCTATTTCTCGCAGTTCACGCTGGTTCCCTATCAGGATTTCGAGACCCAGACGGATTCCTATGCCGCCTTTGGCAAGCTGACGTATGAACTGGCGCCGGGTTTCAAGCTGACCGCTGCCGGTCGCTATACCTGGGACAAGAAGAAGTTCGATGGCGTGTCGGACGTCTATATCCTGTTCTGCGGCAATCCGGGGGTCAATCCGCCGAACCTCTGCCCGACCCTGCCGTTCATCCCGCTGGTGGACAGCGCTGCGGAGTTGCGGGACTTCTATGCGGATGCCGGTATTCCGGTGGTCAATGTCCCGCTTTACGTGCTGCCGCCGATGGCTGGCGGATCGCAGACAGCGCCCTTCGTCCTCAATGCGCCGCTGACGATCAGCGACCAGAAGCTCGATAACGAGAAGTTCACTTATCGCCTGGCGGCGGAGTATGAATTCTCCCCCACCAGCATGATCTATGCGAGCTACGAAACGGGCTATCACTCGGGCGGTTTTGCCTTTGCCAAGGGGCTGGAAACCTACGATCCCGAAACGCTGGATGCCTGGACCATCGGCAGCAAGAACCGCTTTGCCAACAATACGGTGCAGCTGAACATCGAAGGCTTCTACTGGAAGTATCACGATCAGCAGATCAGCCAGTTCGGTTACGATCTGGGCACGCCGCCGACCACGGTGTTCCTCACCCGGAATATCGGCCAGGCGACCATGTACGGTTTCGACGCCGATCTGCAGTGGCTGGCGACGCGCAATACGATGCTGGGCGCGAACATCCAGTATCTGCACAGCAATTACGACAGCTTCGTCTATTACGTGCCCAATCAGGGGCCGCCGCCGCCCACCACGTGTGGCACCTCGCCCACTTCGCAGGTGATCAACGGCAGCACGGTGAGCCTCTATGAAGTGGATTGTTCCGGCAAGTCGGCGCTCAATTCGCCGAAATGGTCGATCAACCTCTTCGGCGAGCAGACCATCCCGGTAGGCGATGATTACAAATTCGTGGTGCAGGCCAATGGGCGTTATCGCTCGGCGGCGGAAATCGACGGCAGCTTCAATCCCTATCTCAAGCCCGGTGAGAGCGTCGTGGCCAATGCCTCGGTCGCGTTCGGGCCGGAGGACGATAAATGGTCGGTCACGGCCTTCGTCAACAATATCGGTAATGACCGGCGGCTCTCCACTGTCTCGATGGTCACTAACGTCAATGCCTTCATCGGCACTTTCGAGCCGCCGCGGACCTATGGTGTGCGCGTGGCGATGAAGCTGCCCTGA
PROTEIN sequence
Length: 823
MTKRFFLNVSAMAVLVAAPLGVARAADEAGGSPSDQGGGITDIVVTAQHVEESAQRAAIAINVVSGDELVRQAVSRPEDLSKIVPALSITNNGGPYSVFFVRGVGNSTLNAYSDPGIAFNYDGVYIGRPSSTSGTFYDLERVEVLKGPQGTLYGRNATGGAINVIPRRPKIGETSAELIASYGNYNALSAQGAVNLGVSDSAAVRVSGNYVSHDPYMDDGTGDLDEFGLRAQLALELSPGADLRIAADYAHQGGVGSFSTYLGDATPNFGMSGFTGYTFNPTDFGPKNGILSPESQAWAGSLFVRQAGRAGRFTSGVPYNDNDYWGVSAELNVDIGDGTLSVLPAYREADLDNLFTAGMNGAKTREKDKQTSLEVRYAGNIGDKADIVVGGYYFGERIKTNTYFSQFTLVPYQDFETQTDSYAAFGKLTYELAPGFKLTAAGRYTWDKKKFDGVSDVYILFCGNPGVNPPNLCPTLPFIPLVDSAAELRDFYADAGIPVVNVPLYVLPPMAGGSQTAPFVLNAPLTISDQKLDNEKFTYRLAAEYEFSPTSMIYASYETGYHSGGFAFAKGLETYDPETLDAWTIGSKNRFANNTVQLNIEGFYWKYHDQQISQFGYDLGTPPTTVFLTRNIGQATMYGFDADLQWLATRNTMLGANIQYLHSNYDSFVYYVPNQGPPPPTTCGTSPTSQVINGSTVSLYEVDCSGKSALNSPKWSINLFGEQTIPVGDDYKFVVQANGRYRSAAEIDGSFNPYLKPGESVVANASVAFGPEDDKWSVTAFVNNIGNDRRLSTVSMVTNVNAFIGTFEPPRTYGVRVAMKLP*