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scnpilot_p_inoc_scaffold_735_25

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(24925..25863)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISJ6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 308.0
  • Bit_score: 373
  • Evalue 2.90e-100
  • rbh
Transcriptional activator NphR {ECO:0000313|EMBL:AKH43186.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 313.0
  • Bit_score: 495
  • Evalue 4.20e-137
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 308.0
  • Bit_score: 373
  • Evalue 8.30e-101

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGTCGCTGCTCGAGCAACTGAGCACGGCAGAGGTCGCGCCGTCCGACCGCCTGCCCTTCTGGAACGATATCGCGCGCCTCGTCGCGCCCATTCAGGTCGAATCCCTTGGGGAATCGCCATTCGAGGCGCGGCTCTATCGCCGCAAATTGCGCGATTGCGAATTGCTCTCCCCCTGTTCCAGCCCGGCCCGCATTTACAGCGCACCGGACCATGAAAATGCCGGGGTGTTGAACATCCAGGTACAGCACCGGGGCCGCAGCACCAATCACACCGGCGGACGCACTGCCGTGCTGGAGGAAGGGGACTTCGTTCTTTACGATCCGTCCAAGCCCCTCTGGCTGAGTTTCGAGGAATATACCCAGGCCATCGTGCTCCGCCTGCCGCTGGCGACGGTGGAGGAACGCATGCCCCATCTGCGCAGCCAGGTGGGCGTTCCCGTCAGCGGACGGCGCGGCGCGGGCGCGCTGTTTTCCACCTTCATGCGCAATGCGTGGGAAGAACTGGAACATGACGGCAGCGGCGAATGGGTGGATGCGCTGGGCGATGCGATCTGGCCCCTGCTGGACATGGCCTATGCCGCATCCCGCCCCACCCTCGAACCTAACCGCCGCGACGAGCGCCGCCGCGCCCTGTTCGAAGCGGTGGAAGCGGATTTGACCGATCCCGATCTGGATGTTCACCGCCTCGCCCGCCGCATGGGTGTTTCGGCGCGCTATGTGCAGATGCTGTTCGCCGAAATGGGCACCACCCCGCGCGCCTTCATCCAGAACCGCCGGCTGGAACTCGCCGCCCGCAGGCTGGAGCGCGAGGGGGGTGACGTGACAGTGACGGATGTGGCCTATGATGTCGGCTTCAACGACCTCTCCAGCTTCTGCCGCGCCTTCCGCCGCCGTTTCGAAATGAGCCCGAGGAATTATCGCGCGGGCGGGCGGGGGTAG
PROTEIN sequence
Length: 313
MSLLEQLSTAEVAPSDRLPFWNDIARLVAPIQVESLGESPFEARLYRRKLRDCELLSPCSSPARIYSAPDHENAGVLNIQVQHRGRSTNHTGGRTAVLEEGDFVLYDPSKPLWLSFEEYTQAIVLRLPLATVEERMPHLRSQVGVPVSGRRGAGALFSTFMRNAWEELEHDGSGEWVDALGDAIWPLLDMAYAASRPTLEPNRRDERRRALFEAVEADLTDPDLDVHRLARRMGVSARYVQMLFAEMGTTPRAFIQNRRLELAARRLEREGGDVTVTDVAYDVGFNDLSSFCRAFRRRFEMSPRNYRAGGRG*