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scnpilot_p_inoc_scaffold_806_2

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(416..649)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbC n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5B45C similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 76.0
  • Bit_score: 128
  • Evalue 3.10e-27
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KEZ16903.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 76.0
  • Bit_score: 124
  • Evalue 8.20e-26
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 74.0
  • Bit_score: 122
  • Evalue 6.30e-26

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
GTGGATCCTCAAGGCTCAGGAGTTTTTGTCAGCGCAGTGACCTGGATGCAGGATACGCTGCTTGGCACGGTTGCCACGACTGTCGCGGTCATCGCAGTGGCGATGGTCGGGTTCATGATGCTGACCGGGCGTATGAACTGGCGCTATGGGGCGGTGGTGATCCTGGGCTGTTTTATCCTGTTTGGCGCTGCCAGCATCGTGGGCGGGATCAGGGCTGCTGCTTTGGGAGGGTAG
PROTEIN sequence
Length: 78
VDPQGSGVFVSAVTWMQDTLLGTVATTVAVIAVAMVGFMMLTGRMNWRYGAVVILGCFILFGAASIVGGIRAAALGG*