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scnpilot_p_inoc_scaffold_809_35

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(38384..40342)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD4 component n=2 Tax=Sphingobium RepID=G2IU25_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 652.0
  • Bit_score: 1225
  • Evalue 0.0
  • rbh
Type IV secretory pathway VirD4 component {ECO:0000313|EMBL:EIM68969.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 652.0
  • Bit_score: 1226
  • Evalue 0.0
virD4; type IV secretory pathway VirD4 component similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 652.0
  • Bit_score: 1226
  • Evalue 0.0

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Taxonomy

Sphingobium indicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1959
GTGCAGCGTAACTTCTGGATCATCGGCCTGTCCGTTGCCGGCGGCACCTTATTGTGCTGCGCCATCGCCGTGCTGGTTGCCCTCTTTGGGATAGGCCAGATCGGCCCCAACACCGACATCACGGCCTTGCCCGCGTGGTTGTGGTACTATCGGGCGGACCCGCTGCTCATTCTCTGGCTAAAGCGCGGCGCGCTGGCGGGCACTGTTGTGGTCGGGCTCCTCGCAATCGGGATTCTGCGCCGCGGGCCGGCATTGCACGGCACCGCCCGGTTTGCGCGCGAAGGCGAGATCCGGCGGGAGGGCCTTCGCGACGCTGCCGGCATCGTTGTCGGCCGCAAGGCTGGACGTTTCCTGATATTCGGCGGGAGCGAGCATGTTCTGCTCGAGGCGCCCACGCGAGCGGGCAAGGGCGTGGGCGTCGTCATTCCCAATCTGCTGACCTGGCCAGACTCGGTGGTCGTGCTCGACGTGAAGCGGGAGAACTGGGGCGCAAGCGCCGGTTATCGGGCAAGAGCCGGTCAGGCTGTGCATCTGTTCGACCCGCTCGACGCGGAGGGGCGGACGGCGCGGTACAACCCTCTGGCGCACATCAGGCGGACCGATGACACCGAGGTCGTCAACGAGCTGCAGAAGATCGGGGGCATGCTTTTTCCGGCGCCGGAGCGATCCGATCCCTTCTGGGCGGAGGCGGCGCGAGCAGCCTTTGTCGGCGTCGGCGCCCTGGTCGCATCCAATCCGGGACTGCCCTTCACGCTCGGCGAGATATACCGCCGCCTCACGAGCGGTGATCCCAAGAGCGACCTTCCCAGGGCGCTCGAGGAGGCCGGCAGGGTGGGCCAGCGCCTCAGCCAAGCCTGCGTGTCCGCGATCCAGGATTTCACCTCGGCCTCGGACAATACCTTTTCCGGAATCAAGCAGACCGTCACGGCGCGGCTTAATCTCTGGCTCAATCCCATGGTGGATACCGCCACCTCGGAGAGCGACTTCGACCTGCGCGAGGTGCGGCGTCGGCGCATGTCGATTTACCTTGGCGTGTCACCTGACAATATCGACCGCATCGCGCCGATCTACAGCCTGTTCCTGCAACAGCTCGTGGATCTCAACACCCGCGATCTCCCTGAGGGCGCGAGCAATGTCCCGGTCCTGGTCCTGCTCGACGAGTTCGCCAGGCTCGGCAAAGCCTCGGTGATTGCGAGCGGCTTCTCTTACGTCGCCGGCTATGGCCTGCGCCTGGTTCCGGTCATTCAGAGCCGCTCCCAGCTTCGCGCAATCTACGGTCCCGATGTCACCGACGAGATCATCGCCAATTGCGGCCTCGAGGTGGTCTTCACGCCCAAGGAGCTAAAGGTCGCGAACGAACTCTCCGAACGGCTCGGCTTTTTCACGATGAACGTGAAATCCCGCAGCCGTACCATCCACGGGCTGCTGGCGAACCGAAGCATCTCAGAATCTGACCAACGCCGCGCGCTCCTACTGCCGCAAGAGCTGATGCAGCTGCCGAAGAACGAGCTCCTGCTCCTTCGCGCCGGCATCCCCCCAATTCGGGGGCGCAAGATCGCCTATTACCGGATGCCCCGTTTCACGCGGCGAGTGATCGCTCCGCCCGTCCTGCCCGCACGTCCAATTGCGGCAATGCTTTCTCCCCCCGCGCCAGCTTCAGGGCAGCAGGGCTCTGGCACGTCTGGGCTGAGCGGCACGCGACGGCAACCGGCGACAAGCTCGGGGGGCGCCATACAGGAGGAAATTGCGATGCGGGAAATGACCGAAGCCGAACTGGCAGGCGCGGCCGAGATCACGGATGACATGCTGGTTCTGGGCGACCTGGCCGAACTGCCGCCCCCGGGCGACGAGGCCGCCGCGATCGCCTTCGTGTCGGCGATGGTCGAGCGGGCACTTTTGCCACCGGTCGGGCAGCCATCCACATCCATTATCCAGGAAAGGACAGCCCATGTCCGCTGA
PROTEIN sequence
Length: 653
VQRNFWIIGLSVAGGTLLCCAIAVLVALFGIGQIGPNTDITALPAWLWYYRADPLLILWLKRGALAGTVVVGLLAIGILRRGPALHGTARFAREGEIRREGLRDAAGIVVGRKAGRFLIFGGSEHVLLEAPTRAGKGVGVVIPNLLTWPDSVVVLDVKRENWGASAGYRARAGQAVHLFDPLDAEGRTARYNPLAHIRRTDDTEVVNELQKIGGMLFPAPERSDPFWAEAARAAFVGVGALVASNPGLPFTLGEIYRRLTSGDPKSDLPRALEEAGRVGQRLSQACVSAIQDFTSASDNTFSGIKQTVTARLNLWLNPMVDTATSESDFDLREVRRRRMSIYLGVSPDNIDRIAPIYSLFLQQLVDLNTRDLPEGASNVPVLVLLDEFARLGKASVIASGFSYVAGYGLRLVPVIQSRSQLRAIYGPDVTDEIIANCGLEVVFTPKELKVANELSERLGFFTMNVKSRSRTIHGLLANRSISESDQRRALLLPQELMQLPKNELLLLRAGIPPIRGRKIAYYRMPRFTRRVIAPPVLPARPIAAMLSPPAPASGQQGSGTSGLSGTRRQPATSSGGAIQEEIAMREMTEAELAGAAEITDDMLVLGDLAELPPPGDEAAAIAFVSAMVERALLPPVGQPSTSIIQERTAHVR*