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scnpilot_p_inoc_scaffold_809_36

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(40332..40511)

Top 3 Functional Annotations

Value Algorithm Source
type IV secretion protein VirB11 n=1 Tax=Sphingomonas wittichii RepID=UPI0003081109 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 59.0
  • Bit_score: 119
  • Evalue 8.60e-25
P-type DNA transfer ATPase VirB11 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 59.0
  • Bit_score: 119
  • Evalue 2.40e-25
Type IV secretory pathway VirB11 component {ECO:0000313|EMBL:BAK68699.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 59.0
  • Bit_score: 119
  • Evalue 1.20e-24

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
GAGCAGCTGACATTGCTCGTCAAGGAATCCGAGGGCGGCCGCGATCTCGCGCGCGATGATATCCGCGGACTTTTGCGAATGCTCATCGATGTGGTCGTCCAGACCCGGCGCCATGGCGGCCGCTTCGAGGTCGAAGAGGTCTACTTCCACCCGAAGGTGGGCGACGCCGGTGCAGCGTAA
PROTEIN sequence
Length: 60
EQLTLLVKESEGGRDLARDDIRGLLRMLIDVVVQTRRHGGRFEVEEVYFHPKVGDAGAA*