ggKbase home page

scnpilot_p_inoc_scaffold_1414_6

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 6299..6982

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 227.0
  • Bit_score: 301
  • Evalue 8.50e-79
ribonuclease III (EC:3.1.26.3) similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 223.0
  • Bit_score: 285
  • Evalue 9.70e-75
Ribonuclease 3 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJ46_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 227.0
  • Bit_score: 300
  • Evalue 1.00e-78
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
TTGAGCGGTAAGGTAACGCTTTCCGACGAGGCGCGCGGCTTTCTGGAGGAGCTGGGCTTCGGGCCGGTCGAGGATGAAGATGTCTGGCTGGAAGCGCTGACCCACGGCAGCACCGGCGATGCGCGCGATTATCAGCGGTTGGAGTTCCTGGGTGACCGGGTGTTGGGCCTCGTCATCGCGGACTGGCTTTACGAGCGGGAAAGTCACGCAGAAGGCAAGCTGTCGCAACGGCTTAACGCCTTGGTCAGCCGCCAGATGTGCGCTTCCGTCGCGCGCAGGATCGGCCTGCCAGATCATATCAGGCTGGGCCCGCAGGCCCGCGCCGATGGCGGTTCGGACAGCGACAATATCCTGGGCGACGTAATGGAAGCCCTGCTGGGCGCGGGCTTTGTGGAACATGGCTTCGATGCCATGCGCACTCTCATCCGCAGCTTGTGGGCCGAAGGGGTCAAGGGCGGCGTCGGCCAGTCCAAACATCCCAAGAGCGCTTTGCAGGAATGGGCCGCGGGCAGCGGCAAGCGCATACCGGAATATACGCTGGTGGACCGGCAGGGGCCGGACCATGCCGCACGCTTCACAGTGGCAGTCAGCGTCAAAGGCGTGGGTGAAGCACGGGCGACCGCCCACAGCAAATCGGAAGCGGAAAAGCAGGCCGCACGGGAATTTATGGAGAAATTTGCATGA
PROTEIN sequence
Length: 228
LSGKVTLSDEARGFLEELGFGPVEDEDVWLEALTHGSTGDARDYQRLEFLGDRVLGLVIADWLYERESHAEGKLSQRLNALVSRQMCASVARRIGLPDHIRLGPQARADGGSDSDNILGDVMEALLGAGFVEHGFDAMRTLIRSLWAEGVKGGVGQSKHPKSALQEWAAGSGKRIPEYTLVDRQGPDHAARFTVAVSVKGVGEARATAHSKSEAEKQAAREFMEKFA*