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scnpilot_p_inoc_scaffold_7168_3

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(2363..3334)

Top 3 Functional Annotations

Value Algorithm Source
Antibiotic transport system ATP-binding protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VLE9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 324.0
  • Bit_score: 499
  • Evalue 2.20e-138
  • rbh
Scaffold27, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30307.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 322.0
  • Bit_score: 505
  • Evalue 5.50e-140
antibiotic transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 318.0
  • Bit_score: 492
  • Evalue 7.40e-137

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGAGTGACAGCAGCGTTGCGATCTCGATCAGGGATGTCGTCAAGCGTTATGCCCCCGTGCGGGGCAAGGGCAGTAAGGCCGGGCAGGGCGGCGAAGGCAAGCTCGCCCTGGGCGGGGTCAGCTTCGATGTGCCGCAGGGCCAGATATTCGGCCTGCTCGGCCCCAATGGCGCGGGCAAGTCCACCTTGATCAACATCATGGCCGGGCTGGTGATGAAGACCAGCGGCACGGTGGAAATCTGGGGCCATGACATCGACCGCGACATGCGCAATGCCAAGGCTTCCATCGGCATCGTGCCGCAGGAAATCGTGTTCGATCCCTTCTTCACTCCGTTCGAGGTGCTGGAGAATCAGGCGGGTCTGTGGGGCGTGCCCAAGGCGCTGCGCCGCTCGGAAGAATTGCTGAAGGCCGTCCATCTGGCGGACAAGCGCAATGCCTATTCCCGCTCGCTTTCCGGGGGCATGAAGCGCCGGTTGCTGATCGCCAAGGCCATGGTCCATTCCCCGCCGATTCTGGTGCTGGACGAGCCGACCGCGGGCGTGGACGTGGAACTGCGCCGCCAGCTGTGGGAACTGGTCAGCGAACTCAACCATCAGGGCGTGACGGTGGTGCTGACCACCCATTACCTGGAGGAAGCCGAGGAATTGTGCGACCGGATCGCCATCATCAATCACGGCCAGCTCATCACCAACCGCCCCACGCGCGAATTGGTGGGCATGACGCGGGAGAAGATCCTGCGGCTGTCTCTGGACCGCGACCTTGCCGATCTGCCCAGCCACCCCGCCTTCGTCAAATGCCGCAAGATCGGGGAGCGGGAGATCGAGATCACTTATGACAAGGATCACGCCACGGCGGGCGAAGTGCTGGGCCAGGTGCAGGCGCAGGGCTTCGTCATCGTGGATGTTTCCACGCAGGAGCCGGACCTTGAGGATGTGTTCGTCCAGCTGACGAGCGACAGGGAGGCGGCATGA
PROTEIN sequence
Length: 324
MSDSSVAISIRDVVKRYAPVRGKGSKAGQGGEGKLALGGVSFDVPQGQIFGLLGPNGAGKSTLINIMAGLVMKTSGTVEIWGHDIDRDMRNAKASIGIVPQEIVFDPFFTPFEVLENQAGLWGVPKALRRSEELLKAVHLADKRNAYSRSLSGGMKRRLLIAKAMVHSPPILVLDEPTAGVDVELRRQLWELVSELNHQGVTVVLTTHYLEEAEELCDRIAIINHGQLITNRPTRELVGMTREKILRLSLDRDLADLPSHPAFVKCRKIGEREIEITYDKDHATAGEVLGQVQAQGFVIVDVSTQEPDLEDVFVQLTSDREAA*