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scnpilot_p_inoc_scaffold_7880_3

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(2017..2973)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 318.0
  • Bit_score: 456
  • Evalue 4.50e-126
Ribosomal protein L11 methyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIS6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 317.0
  • Bit_score: 460
  • Evalue 1.40e-126
  • rbh
ScaffoldA10, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29765.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 300.0
  • Bit_score: 467
  • Evalue 2.10e-128

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGAATTGGAAGATCAGCGCCTTCGCCCCCAAGGAAGCCGTGCAGGCCGCGCTCATAGCGCATGAGGATGCGTGGGACTGGAACCCTGAAGTCGTCCTGTCGGGCAGCGAGATCGCGGAAGACAAGCCCGACGATTGGGTGCTGGAGGCCTGGTATCCACACAAGCCGACCGCCGCCGACAAGGCGGCGGTGAAGGCATTGTTCGCTGAAGGCGCGCCGGAACTGATCGTGGAGAAGCTGCCGGATGCCGATTGGATCGCCCTGAGCCAGGAAGGGGTCGAGCCGATCCGCGCGGGCCACTTCCATGTGCGCACGCCGGAATTCCCGGCCAGCACCGAGCCGGGCGTCACCGATTTCGTGATTCCCGCCAGCCAGGCCTTCGGCACCGGCCAGCATGCGACCACCGCCGGATGCCTCGCCATGCTCACCGCGATGAAGGCACGCGGCGTGGAAGTGCGCAATCTGGCCGACATCGGCACGGGCACCGGCCTGCTCGCATTTGCCGGTCTGGAACTGTGGCCGCGCGCCCTTGCTACCGCCAGCGACATCGATCCCGTCTGCGCAGGCGTGGTGGAGGAAAATTCCGCGCTCAACCGCATTCCCATGGGCGCACGCCGGGGCGAACTGACCATGGTGATCGCCGATGGCATGGCAGACCCGCTGCTCGCCGCGCGCGGACCTTATGATCTTCTGATCGCCAATATCCTCGCCGGGCCGCTGGTCGAACTGGCGCCCGATTTCGCCCGGGCAGTGGTTCCGGGCGGGCATATGCTGCTGGCCGGGCTGCTCACCACGCAGGAATCTGCCGTGCGCCGCGCTTGCCGCCTCGCCGGTTTCCGCCTCGCCGCGCGCATGGTGAATGGCGACTGGTCGATCCTGTGGCTGAGAAAACGTGCCGGAGTGAATGTCCGCGCCGCCCGGCCGGGCAGGATGCCGGATTGGTCCCGCCGCTGGTAA
PROTEIN sequence
Length: 319
MNWKISAFAPKEAVQAALIAHEDAWDWNPEVVLSGSEIAEDKPDDWVLEAWYPHKPTAADKAAVKALFAEGAPELIVEKLPDADWIALSQEGVEPIRAGHFHVRTPEFPASTEPGVTDFVIPASQAFGTGQHATTAGCLAMLTAMKARGVEVRNLADIGTGTGLLAFAGLELWPRALATASDIDPVCAGVVEENSALNRIPMGARRGELTMVIADGMADPLLAARGPYDLLIANILAGPLVELAPDFARAVVPGGHMLLAGLLTTQESAVRRACRLAGFRLAARMVNGDWSILWLRKRAGVNVRAARPGRMPDWSRRW*