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scnpilot_p_inoc_scaffold_11529_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(39..815)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbJ n=1 Tax=Hoeflea sp. 108 RepID=UPI00036FDECC similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 258.0
  • Bit_score: 437
  • Evalue 8.10e-120
  • rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KEQ52091.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 258.0
  • Bit_score: 450
  • Evalue 1.70e-123
conjugal transfer protein TrbJ similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 258.0
  • Bit_score: 408
  • Evalue 1.50e-111

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Taxonomy

Sphingobium chlorophenolicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGACACGCTCATTCCGTTCGCGCTCACGCGCACTGCGTTTCGCCACGATCATCGCTGCGACACCAGTCGCTATCTCGATCTTTATCAGCACGCCAGCGGCGGCCCAATTCGGCGGCATCGTCTACGATCCGACGAACTACGCGCAGAATGTGCTGACGGCTGCGCGGACGCTCCAGCAGGTCAACCAGCAGATCACGCAGCTTCAGAACGAAGCGACAATGCTGATCAATCAGGCCCGCAACCTTGCGAGCCTGCCATACTCGTCGCTTCAGCAGCTTCAGCAATCGGTACAGCGCACGCAGCAGCTCCTGCAACAGGCGCAGGGCATCGCCCTCAACGTCCAGCAAATCGATCGCGCGTTTCAGACCACCTACGGCAATGCATCGATGTCGGCTTCCGATCAGGCGCTTGTCGCGCAGGCGCGTGAACGCTGGCAGAACACCGTCGGCGGCTTGCAGGACGCCATGCGCGTCCAGGCCGGCGTTGTTGGCAACATCGACACCAACCGTAGCGAGATGTCCGCGCTTGTCGGGCAGAGCCAGGGCGCGACCGGTGCGCTGCAGGCGACCCAGGCCGGCAACCAGCTTCTCGCCCTGCAGGCGCAGCAGCTTGCCGACCTCACCGCGGTCGTGGCCGCCAACGGCCGTGCGCAGAGTCTGTCCGAGGCCGAGCGTGCGGCCGCGGCCGAGCAGGGTCGTGAGCAACGCCGTCGCTTCCTGACGCCTGGCAGCGGCTACCAGCCGGGCAACGCCCGTATGTTCCCGAACGGCAACTGA
PROTEIN sequence
Length: 259
MTRSFRSRSRALRFATIIAATPVAISIFISTPAAAQFGGIVYDPTNYAQNVLTAARTLQQVNQQITQLQNEATMLINQARNLASLPYSSLQQLQQSVQRTQQLLQQAQGIALNVQQIDRAFQTTYGNASMSASDQALVAQARERWQNTVGGLQDAMRVQAGVVGNIDTNRSEMSALVGQSQGATGALQATQAGNQLLALQAQQLADLTAVVAANGRAQSLSEAERAAAAEQGREQRRRFLTPGSGYQPGNARMFPNGN*