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scnpilot_p_inoc_scaffold_2924_4

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: 6015..6935

Top 3 Functional Annotations

Value Algorithm Source
ribosomal RNA-processing protein rrp42 (EC:3.1.13.-) similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 275.0
  • Bit_score: 125
  • Evalue 2.30e-26
PREDICTED: exosome complex component RRP42-like n=1 Tax=unknown RepID=UPI000192526C similarity UNIREF
DB: UNIREF100
  • Identity: 33.6
  • Coverage: 280.0
  • Bit_score: 162
  • Evalue 7.70e-37
Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_78 {ECO:0000313|EMBL:CBY11742.1}; TaxID=34765 species="Eukaryota; Metazoa; Chordata; Tunicata; Appendicularia; Oikopleuridae; O similarity UNIPROT
DB: UniProtKB
  • Identity: 34.1
  • Coverage: 287.0
  • Bit_score: 157
  • Evalue 2.70e-35

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Taxonomy

Oikopleura dioica → Oikopleura → Appendicularia → Chordata → Metazoa

Sequences

DNA sequence
Length: 921
TTGGCCGACAACCTGCGCTGTGACGGCCGCACATGCTCCGAGCTGCGTCCCTTCTCGCTCCAGCTCAACCTCATCCCCTCGGCCAACGGCTCGGCGCAGGTCCGCCTGGCCGACACCTGCGTGCTCGCCGTGGTCAAGGCCGAGATCGGCGCCCCGCTGCCCGACGACGGCGCGGCCGGGGAGCGCTTGGGCCGTTTCGTCATTGCCGTGGACCTGACCGCGAACCCGACGGGCGCGCTGGACCGGCGCGCGGCCGAGGCCGCGAGCGTGACGCTGACCGCGCAGGTCTCGCGCATCCTCGTCGAGTCGGGCGCGCTCCGCCGCGAGCTGCTGTGCCTCATCCCGGGCAAGAAGTGCTGGGTCATCTCCATCGACGCCGTTGTGCTCTCGGCGGCGGGCAACGTGCTGGATGCGACGCTCATCGCGGTCAAGGCCGCGCTTAAGAGCACGCTCATCCCCGCCGTGACCGTGGTGCGGCGCGCGCCCGCCGACGCCGAGACGACCGCCACGGCCGCCGCGGGCCGCGCGAGCGACGACGTGACGCTGGAGGTGAGCGACGACCCGGCCGAGGCGCACGCGCTGGCGGCTTGGGACCCGCGTGTGCCGCTGACGGTGACCGTGAGCCGCGCGGGCGCTACGGCCTTCGTTGACCCGGACCAGAGCGAGGAGGCGTGCGTGACGGCCCGGGTCAGCGTCGCGTTCAACGACAAGGGCAAGATGCTGGGCACGTTCAAGCTGGGCGAGGGCGCGCTGGCGCCTGAGTCCGTGCGCGGCATGGTGCGGCTGGCCGCGCAGGTGGCGCAGCGCCTGCGCGGGCAGTTCGACGCCGCGTTTGACGAGGCGCTCGTGGCCGCCGGGGGCGAGGCCGCCGGGGAGGACGGCGGCGCCGGCAAGGACGAGGGGAATGACGACGGGTATTGA
PROTEIN sequence
Length: 307
LADNLRCDGRTCSELRPFSLQLNLIPSANGSAQVRLADTCVLAVVKAEIGAPLPDDGAAGERLGRFVIAVDLTANPTGALDRRAAEAASVTLTAQVSRILVESGALRRELLCLIPGKKCWVISIDAVVLSAAGNVLDATLIAVKAALKSTLIPAVTVVRRAPADAETTATAAAGRASDDVTLEVSDDPAEAHALAAWDPRVPLTVTVSRAGATAFVDPDQSEEACVTARVSVAFNDKGKMLGTFKLGEGALAPESVRGMVRLAAQVAQRLRGQFDAAFDEALVAAGGEAAGEDGGAGKDEGNDDGY*