ggKbase home page
Advanced Search
Search Help

scnpilot_p_inoc_scaffold_4705_3

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: 2963..7900

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 6-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBB2C3 similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 338.0
  • Bit_score: 270
  • Evalue 1.10e-68
Oncorhynchus mykiss genomic scaffold, scaffold_1534 {ECO:0000313|EMBL:CDQ81646.1}; TaxID=8022 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Te similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 344.0
  • Bit_score: 268
  • Evalue 5.80e-68
SNF2-like protein similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 284.0
  • Bit_score: 174
  • Evalue 2.30e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oncorhynchus mykiss → Oncorhynchus → Salmoniformes → Neopterygii → Chordata → Metazoa

Sequences

DNA sequence
Length: 4938
GTGCACTTACCCTCATCCGCGGCCGACGGCTCTGGCTCCGGTCTGGCCGTGCCGGGCGCTCTCTGGGACGCTCTGCTGCCTCATCAGCACCACAGCCTCTGCTGGCTGTGGGAAATCCACCAGCGCCGCACGGGTGCCATTATCGCCGACGAAATGGGTCTCGGTAAGACGATCCAAGTTTGCGCTTTGCTCAACGCGCTCGAGTACTCGGCACACGTGGGCGTGCGTCCCATGCGTCTGCGGCCGACTCTGATCGTGTGTCCGGCGACACTCATGTCTCAGTGGCTGCTCGAGCTGCACCTGTGGGCGCCGCAGCTGCGCACGGTGGTGTACCACGAGTCCGGACGCTCGCGCGCCACCGGTTCCGCGGTACTCGCGGCTGCGGAGCGCACGGTGGAGAGGCACGGAACACATGCCGTCGTGATCACGAGTTACCAGATGGTGTTGCGCCACGCGAAGGAGCTGCTGCAGCAAGGGTGGAGCTATGTCGTGCTTGACGAAGGACATAAGATCCGTAACCCGACTGCGAAGATCACGCAAATCATCAAGAAATTTAACACCCCGCGTCGCATCGTACTTACAGGCTCACCGATTCAGAACTCACTGAAGGAACTCTGGTCACTCATGGACTTTGCAGTGCCCGACCGGCTCGGTACGATGGAAGTCTTCGAGGCTGAATACGCTTCTCCCATCAACTCCGGTCGGTTTAGCAACGCATCTGACGCGCAGATCCACCGAGCCGTTAAGTTAGGCCGCGACCTGCGTGCGTTAGTTAAGCCGCACATGCTGCAACGCCTCAAGGCTGAGGTCGAGCTCAACTTGCCCGGCAAGACTGAGGACGTTGTGTACTGCGGGCTGACACAGGCGCAGTATGATGTCTACACAGCCCTTGTCAACGGCGAAGACGTAGTGCGTATGAACGCTTTGACAACTTCTGTCACATTGGACGAAGTCGACGACGTTGACGACGGACAAGGGTTACTCTCAGGCTCGGATGCAGACGATGACGAAGAGGACGCGCTTGACGATGATGATGACGATGATGATGACGACGATGACGGTTTCGAGTACGACAATGCATACCGCCAGCAAAAGCGCCGGAAGAACGTCAAGAAAGAGCCCCAGAACAAGCAGTCTAACTCTAACGCGAGTTCATCGTCTAGATCAAGTTCTGTGGCCGCTGATAGCAGCAGCAACAACAGCACTGGCAGCAGCAGTGGCAGCAGCGACGGACAACCGCGCCGTGTGGTGACTCTGAGCTCGGACCCCAGCTTCTACGCCGACGGCGGCCGCCGGCCAGACTCCAAGGCGCAGTGGGATTCCCGCCGCAATTTGACCGGGTTTGTCCGCCACAGGCGTGACATGCTCTCTCGTTTACCGCCGGGGCTCGCGCGCACCGCCGCGGTGAACGACGAAACCGGACTAGGACGGCTTTTCTCCGCTATCACAGCGCTGCGCAAGGCGTGCAACCACGCTGACTTGGCGCTCGTCGGGCATGAAGAAGTCGACCGCGAAGTGTTGCGCGCGCGTGCGGTTCGCGACCGGCAGAGGAGCGCTGCGCTTGAGATCGAGAAATTCGGTGAAGTCGTGTCGCACGGCTTGAAGGCTTTCGCCCCCACTTCAGGCGATTCGGCGACAGCCTTGGGCAGTTATCGTGAGTCGATGAACGCGGCGACCGGTGCAGTGACGCGGCATTCCGGTGACCGTGTGTTCGTCAGCACGGATGCGCGGCTTAAGTGGCGCCAGGACCAAGAGCAGGAGCGGCGACAGCGCGTTGCTGACGCTGACGCTGACAGTGACGCTGAGAACGACACTGCTGGTGGTGGCGATAGTAAGCGTCGTCGCATTGCGCCCACGGCTGTTTCAGGGCTGGGCCGTGGTAACTCGAACCCGTGGGCCATCAAAAGCGAGCTCAATGATGACGACGACAACAACAACGACGATAATGACAACGAGAATGATAGCCGTGAGCAGCAGCAGCGGAATGTTCAGCTCCGCGCCCCCGCGTCTGCCATTGCAGTGTCTAAGTCTTTACCCGCTGTGCGCAACGGCCGTGACGCGCGCATCGCTAACATTGCAGACTACGGCGCCCCTGAGCGCTCTGGCAAGCTCTTGGCGCTGCTGCATTTCCTCTCTCTTTGGCACCAGCAGGGCCACCGCGTGCTCATCTTTACTCAGTCACGCCAGGCACTCGATATCGTCGAGCGCGCGGTTGTCGCGGCGCGGTACATCTGTCTCCGTCTTGACGGCACGACTCCAGTCCGCGCCCGTATCCCGCTCGTAGCGCGCTTCAACCGCGATCCTTCCATCTTCTGCTTTCTGTTGACGACAAAAGCCGGTGGACTGGGTATCAACTTGACTGGCGCCGACCGTGTAGTGATCTTCGATCCAGACTGGAACCCCGCGACCGACGCGCAGGCCCAGGACCGCGCGTACCGCATCGGACAGCGACGCGAAGTTAAGGTCTACACGCTCATCACCAAAGGCACCATCGAGGAGAAGATTTTGCACCGACAGCTGTTCAAAAAGGCGCTTGCGTCGTGCGTTGTCAAGACGAACGCCACGGGCTCTGCCGCCACCAACGCCGCATCAGGCGGGTCCGCAAGCGCAATGGCCGCCGCCCGCGAAATGGCGCAACTGCGCCGCGCGATGTCGAAAGACGCGCTGCACGAGCTTTTCCTCCCGCCGCCGCCGCCGCTCACTGCCGCTGCCATTGCGCGTATGCGTGTGTATGAGCGCTCAGCAGCGCTCGCAGTGCGCGAACCGAAGCGAAACGGGGCGGGTTCTGTCTCCGCTAATAGCAGTGGCGTCGTTGTGACGACGACAATGGCGGCTTCCGCGAGGGCTGCTGCGGACGCTGCGTTGGACGCTGACGGTGCCTCCGCCGCCGCAGGTGAAGCTGTGACCGACGGCGCTCTTGTCGTCGAGCGTCAAGCTGCGACGTTGTCTCCTGAAGCTGCCGCTGCCGCTGCTGCTGCCGCCACGGCGCCGCGCAACGACGCCCTGTTGATCCGGGAAATCATGAAAGAGCGGCACAACCGCCGTGAAGCCGACGCCAACAACGGCAGCGCAAGTGCTGCGACCGGTGGAGATGACGGTGAGCCGCAGCATATCTTCGCGCGGTTGATGCAAATGCCCGACGAAGACAGCGCCGGCAACAATAGTGGCAATGGAGATCTGGGCTTTAACGTCTCGTCTGTGTCAACTGCTGAAGCTGCTGCTATCCGCGCTGCCAGGGACGCCAAAGAGCGTTTAGAAGCCTCTGCACGCATGCGCCGTATCGCGCGCATGGAGGAGGCACGCGGCCAAACTTCGGACAAGGGCGCCTCAGCTTCGGCGAGTGGAGCCAAACAACAACAGCAACGTCCCGGTGCCAAACCCGTCCCTGGTCGTCCCGTAAACGGGAGTCCCGGTGCAAATGGCACTGGCGCTGGCTCTAATGCTGCCGGTCAGGGCCAGAGGCCGACTGGGCCATACCGTCCTCCGACCGCTGTCGTGCAACGGCCCGCAATGACTGAGCGTGAGGCCGCTGATGCGTTGTACGCTCGCCACTCTGCGCCATCTAAACAACGTATCGCGGAGATTCAGCTTGCGCTCGCGACGAAACACGCGCGCGCCGCTGCCGCTGCTGCCACCGCCGGCAACGGCAACGGCAACGGCGGGGTTGCGACCGGTGTGCCAGACCACGTTGCACAGCGTGCGCGCGCCGCACTGGCTGCGAACATCACAGCGGCTAACGCGGCGGCTGCGAAGGAGAACATGGCCCGCGCCGCCGCCGCTGCGAAGGCAGCGGAAGCGCGCGCCAAGGCTGAGGCTGAGGCGGCGGCGCGGGCGGCGGCGATTGAGGCCGCGCGCTCTGCCGCTGATGAAGCTGTTAAGGAAAAGCAGCGGCTGCGGTTAGAACAAGCCCAACGTCAGTCCCTCGCGGCACTTGGCGTGACGCGTATTGGCCAAGCGCAAAACAGCAATAACAACAAGTCTCAGGCGGCGGATAATCTTGCTCGCGCTAGTGCTGTTCGCGGTGGTGGTGATGATGACGTGATTGTGCTTGATTCATCCGACGACGAAGCTTTCTCAGCTACAACGTCTGCGTCTGCGGCGGCAACTGCACCGCGTTACAGCAGCATTCGCCCCGAAGCAAGTGCGAGTGACGCGTCACTGGCTGGCCTGAAGCCCCCATCCGCCGCTGGGGCGATCTCTGGCGGCAGCTCAGTCAGCGCTGCGACAGCGAAATTGCCGATTATGGCTTCTCTCATAGTGCCTGCAGCGGTGACGGCGAATATGTCCAAGTTCCTCGGCGCCCCCGCTTCACTGCGAACGACTGCTGGTGACTCCTCGCAATCCCAGCCGCAGCCGCAGCCACAAACGCTGCAGTTGCAGGCTGGTTCGCAGTCAATCACAGTGGAGACGCAGTCAGTGGCGGCGGTCACTCAACAAGTGTTCGACGCACAGCAACAACAGCAACAGCAACAGCAGCAACAGCGTGGGTTTGCGTCGAAGCAAGTGTTGCAATGGGCTGCTGCGCAAGGCCAAGGCATCAACAATACAGCCGGCGCTGCACAGCAGCCATCTGGAGCGCAAACGCAGTCGGGAGCAGCTCTGCAGACGCATGCGCAGCGCATGCATGCCGCTAAGGTGCAAGCCCGTCTGCAATCGCAGGTGGTGCAGCCACAGTTGCAGTCGCAGGCTCTGACTCAGGCTCAGGCACAGGCGCAGTCGCAGTTAAACCAAGTGCGCGCTCAAGCGCAAGCTGCACTTGCCACCTTCGCCCCTGCTGAAGCACTCCAACAACAACAACAACAGCAGCAACATCAGCAGTTGCAGCGGCAGGTGTTGTTGCAGCAGCCGCAACAGGCGATTCGCCGTGTCAGCGACGACCCTTCAGCCGCGGTTGCGGTGACTGTGGACCGGCCGGCTCCTATTGATGCTCAGTACATT
PROTEIN sequence
Length: 1646
VHLPSSAADGSGSGLAVPGALWDALLPHQHHSLCWLWEIHQRRTGAIIADEMGLGKTIQVCALLNALEYSAHVGVRPMRLRPTLIVCPATLMSQWLLELHLWAPQLRTVVYHESGRSRATGSAVLAAAERTVERHGTHAVVITSYQMVLRHAKELLQQGWSYVVLDEGHKIRNPTAKITQIIKKFNTPRRIVLTGSPIQNSLKELWSLMDFAVPDRLGTMEVFEAEYASPINSGRFSNASDAQIHRAVKLGRDLRALVKPHMLQRLKAEVELNLPGKTEDVVYCGLTQAQYDVYTALVNGEDVVRMNALTTSVTLDEVDDVDDGQGLLSGSDADDDEEDALDDDDDDDDDDDDGFEYDNAYRQQKRRKNVKKEPQNKQSNSNASSSSRSSSVAADSSSNNSTGSSSGSSDGQPRRVVTLSSDPSFYADGGRRPDSKAQWDSRRNLTGFVRHRRDMLSRLPPGLARTAAVNDETGLGRLFSAITALRKACNHADLALVGHEEVDREVLRARAVRDRQRSAALEIEKFGEVVSHGLKAFAPTSGDSATALGSYRESMNAATGAVTRHSGDRVFVSTDARLKWRQDQEQERRQRVADADADSDAENDTAGGGDSKRRRIAPTAVSGLGRGNSNPWAIKSELNDDDDNNNDDNDNENDSREQQQRNVQLRAPASAIAVSKSLPAVRNGRDARIANIADYGAPERSGKLLALLHFLSLWHQQGHRVLIFTQSRQALDIVERAVVAARYICLRLDGTTPVRARIPLVARFNRDPSIFCFLLTTKAGGLGINLTGADRVVIFDPDWNPATDAQAQDRAYRIGQRREVKVYTLITKGTIEEKILHRQLFKKALASCVVKTNATGSAATNAASGGSASAMAAAREMAQLRRAMSKDALHELFLPPPPPLTAAAIARMRVYERSAALAVREPKRNGAGSVSANSSGVVVTTTMAASARAAADAALDADGASAAAGEAVTDGALVVERQAATLSPEAAAAAAAAATAPRNDALLIREIMKERHNRREADANNGSASAATGGDDGEPQHIFARLMQMPDEDSAGNNSGNGDLGFNVSSVSTAEAAAIRAARDAKERLEASARMRRIARMEEARGQTSDKGASASASGAKQQQQRPGAKPVPGRPVNGSPGANGTGAGSNAAGQGQRPTGPYRPPTAVVQRPAMTEREAADALYARHSAPSKQRIAEIQLALATKHARAAAAAATAGNGNGNGGVATGVPDHVAQRARAALAANITAANAAAAKENMARAAAAAKAAEARAKAEAEAAARAAAIEAARSAADEAVKEKQRLRLEQAQRQSLAALGVTRIGQAQNSNNNKSQAADNLARASAVRGGGDDDVIVLDSSDDEAFSATTSASAAATAPRYSSIRPEASASDASLAGLKPPSAAGAISGGSSVSAATAKLPIMASLIVPAAVTANMSKFLGAPASLRTTAGDSSQSQPQPQPQTLQLQAGSQSITVETQSVAAVTQQVFDAQQQQQQQQQQQRGFASKQVLQWAAAQGQGINNTAGAAQQPSGAQTQSGAALQTHAQRMHAAKVQARLQSQVVQPQLQSQALTQAQAQAQSQLNQVRAQAQAALATFAPAEALQQQQQQQQHQQLQRQVLLQQPQQAIRRVSDDPSAAVAVTVDRPAPIDAQYI