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scnpilot_p_inoc_scaffold_6362_4

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: 1761..4748

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=3880 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Sperma similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 180.0
  • Bit_score: 173
  • Evalue 1.20e-39
tRNA-dihydrouridine synthase n=1 Tax=Solanum lycopersicum RepID=K4C942_SOLLC similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 193.0
  • Bit_score: 171
  • Evalue 3.20e-39
nifR3 family TIM-barrel protein similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 168.0
  • Bit_score: 99
  • Evalue 5.70e-18

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Taxonomy

Medicago truncatula → Medicago → Fabales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 2988
GTGGTGCAGCTGGGCGCGGGCAATGGCGTCGACGCCTTGGCCGCGGCGACAGTGGTGGCACGTGACTGCCGCGCCATCGACATCAACATGGGCTGTCCGAAGATGTTCTCGCTGCAGGGCGCGATGGGCGCCGCGCTGCTCACGCGTCCGGAACACGTGGCGGACATCTTCTCCACGCTGCAGCGCAACCTGCCCGCGGCGCTGCCCTTCACGGCCAAGATCCGCATGCTGGCCGACCCTCGCGACACGCTGGAGCTGGTCCGCCGCCTTGAGGCCATGGGAGTGGCCGCGATTGGCGTCCACTGCCGCTTCCGCGCAGACCGGCCGCGGTTCCGCGCGCTGCCGCTGTTGCAGTTCCCGCTGCTGCAGTCCGCGGCGCGCGTGCCGCTGCTGTACAATGGCGACGTGTTCACCTTCGAGGATGTGCAGCGCTACCGCCAGGTCACGGGCGCCGCGGGCGTGCTTGTGGGCCGCGGCGCCATGTGGAACCCGTCCGTCTTCGGCGCGCCCCTTAGATCCTCCGCCGAGGCCGAGGCGTCTAAGGGGGCGTCGCCTCTGTCTCCGGGAGAGTGGCACGACTACTTTGACGACTGTGGCCACGGCGTCGACTTGAACGAGTATCTCCTGCGGCAAAACGGTAAGCACGGCGTTCGCAACGCTCATGGTGACGATCGTGATTATGATCAGGGCGACGGGTTTTCCTCTTACACGAGTAGCTACGACTTGCACTTCAACAACAACAGCAACGCGAACAGCATTGGGAACACAAGCAGCAGCGGCAGCAGTACCACTGGCGGCGTAACTTCCCTCGTTGGCTGCCGCCGCGCCTCCGTCGACACCATCTGCGCCTTCAACCCCCACCTGGTTCCGTGGCACTTTACCGACTCCTTCGGCAACGCAGGCGTCTCGCATAAGCTGCGTGACGTGCCGCTCGCGCTGCCCTCGGCGTACTGCGGCCTAACTTCCAGCGACGGCGGCCTAACTTACCACGACCTGCCCTCCGAGGACAGCAACAGTAACAGCAACAGCACAGATGCAGCTGTCACTGCTGGCGCTGACAGTCGCAGCAACTCTGCTGCTGCTGCTGCTGTTGCTGCTGAGAGTAAGTACCCTGTCAGTGCTTCCGTCAAGGGCGGGGCATGGATCAACGCGTATGAGCCGATCTGGCGTGATGTCCTCAGTCAAAGCAAGACTACTCGCGCGCTTGCCACAGATGCGGCAACCGCGAGTCCTTTTACTGCTGCGGACCAGGGCGGCGTGACTTCAGAGCCGCGCGGCGGGCTCCCTTACTGGTGGACAGACTCTGCGCGCCGTGAGGCCGCGAGGGCGGACGCCGCGCGCGACGAGACGACTGCGCTATGGCTCGAGGCGCGGGCCGCCGTCGTCGAGGCCGCGAAGGCCAAGGCGGAGGCGCGGGCGATGGCGCAGGCGCAAAAGGCACAGCAGCAGCAACAACAACAGCAACAACAGCAGCAACAAACGCAGAGCACTGATGCTCGCCCCAGTGCGGACGCGAGCGCTGCACAGAACAGCACTGACTCTGGCTCGACTGGTGGTGTAAGTGCCAACACAGTGAGCGCCAACAAGGACAATGTAAGTGCCTCGGATGATTTAAGTGCCAAACAAAAGCTTTCGAGTGTAAGTGTCGCGCCCCCTTACACGGCCGCGGACCTGGGCTGGGTGTGGCGCTTCAGCGACGAGGCCACTTACACGTCCCCCCTTACCCGCGCCCCTTACATGGCGCCCGTCTCCGAGACGCTGAGCCGGTACTTGGCCGCGGCCGTGGCCACCACGAACGCTGTCAAGAACATTCGCTACAACGCGATGGAGATGATGAAGGCCCACGCCGGGGTCACCACGGTGGCGGCATGGCAACGGATACACAAGGCCGCGACGGTCGCCAGCCTGGTGAAGGAGATCACCGAAGTGGTGGCCACTGTCGGCACGCTGCGCGGTATCGTGGCGTGCGCGAAAGATAACCCGCTCAACGATGTCGAGTACGAGGAGAAGTTCATTATCAAGCAACTTCTGCTCGCGAAGCAGCAACAGCAACAGGCTCACCCCTCAGACAGCAGTGTCAGTGCCAAAGACTCTCAGCCAAGCTCTAGTGTGGATGGCCAGGAGATCCTCACATCTGAGCTAGAGTCTAAGGGTCTCGCGTATGGGTACTTAAACCCGATGCGCGTGTCCGCGTTCGCGCCTAGGCCCTTACCCGGTAGCACTTACGACTACACCTACGATGCGAACTTGCTCCCCAACAAAGACGCCGTCACGAGCACCGACCCTTGCAGCACTGACCGCGACATCAGCGGCAGGAGCCGAGAGGTTGCGCTGGCCGTGGCGGCCGACGCTCTAGCTGCCCGCATCCGCGACGCGAGCAGCAGTAGTACCGCAAACAGCAAATCTAAGCATCATCACCACAATAACAACAACAGCAACGGCAATGCTGCTGACGACGAGTGCAAGGGCGAGTGCTCTGCTAACGCTGACGCTGGTGATTCCGAGTCTAAGGGCGGCGATCACTCAAGGGGCCAGCAGAAGTCTAAGGGCCAGTCTAAGGGGCAGGCGCCTGCGCACGCGCCGGGCACGGCCAAGGGCTCGAAGCGCCGCCGCCAGGAGCTTGCGATCCTCAGCCATGGCGCCTCGGCGAGCAGCAGCTCCGCCAGTGTCGCTGTGAGTCCTAGCAGCAACGGTACTGAGAACACCGATGCGAGCAGGGGCGCCGAGTCTGCTGCGAGTGCGAGTGCCGCTGCAGACGATAGGGGTGACACTGCTGCACTCGACCTCAAGGGCAACACAAGCGTTGGCATCAAACAGCACAATCCTGCGCTCCCAAGCACCTCTCAGAGCAACAACAGCAACAACAACAGTACTTGTAGCGACGGCAAGGCGGCTGCTGCAGCTGGCAGCGAGCAGCAGCAGCTGGCGGCGCCGAACCAAAACGACGACTTCGTCGGTGTGATCTTCGGCGACAGGTTCAAACTGTGA
PROTEIN sequence
Length: 996
VVQLGAGNGVDALAAATVVARDCRAIDINMGCPKMFSLQGAMGAALLTRPEHVADIFSTLQRNLPAALPFTAKIRMLADPRDTLELVRRLEAMGVAAIGVHCRFRADRPRFRALPLLQFPLLQSAARVPLLYNGDVFTFEDVQRYRQVTGAAGVLVGRGAMWNPSVFGAPLRSSAEAEASKGASPLSPGEWHDYFDDCGHGVDLNEYLLRQNGKHGVRNAHGDDRDYDQGDGFSSYTSSYDLHFNNNSNANSIGNTSSSGSSTTGGVTSLVGCRRASVDTICAFNPHLVPWHFTDSFGNAGVSHKLRDVPLALPSAYCGLTSSDGGLTYHDLPSEDSNSNSNSTDAAVTAGADSRSNSAAAAAVAAESKYPVSASVKGGAWINAYEPIWRDVLSQSKTTRALATDAATASPFTAADQGGVTSEPRGGLPYWWTDSARREAARADAARDETTALWLEARAAVVEAAKAKAEARAMAQAQKAQQQQQQQQQQQQQTQSTDARPSADASAAQNSTDSGSTGGVSANTVSANKDNVSASDDLSAKQKLSSVSVAPPYTAADLGWVWRFSDEATYTSPLTRAPYMAPVSETLSRYLAAAVATTNAVKNIRYNAMEMMKAHAGVTTVAAWQRIHKAATVASLVKEITEVVATVGTLRGIVACAKDNPLNDVEYEEKFIIKQLLLAKQQQQQAHPSDSSVSAKDSQPSSSVDGQEILTSELESKGLAYGYLNPMRVSAFAPRPLPGSTYDYTYDANLLPNKDAVTSTDPCSTDRDISGRSREVALAVAADALAARIRDASSSSTANSKSKHHHHNNNNSNGNAADDECKGECSANADAGDSESKGGDHSRGQQKSKGQSKGQAPAHAPGTAKGSKRRRQELAILSHGASASSSSASVAVSPSSNGTENTDASRGAESAASASAAADDRGDTAALDLKGNTSVGIKQHNPALPSTSQSNNSNNNSTCSDGKAAAAAGSEQQQLAAPNQNDDFVGVIFGDRFKL*