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scnpilot_p_inoc_scaffold_8771_4

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: 3317..4237

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1E4_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 291.0
  • Bit_score: 275
  • Evalue 4.80e-71
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 291.0
  • Bit_score: 275
  • Evalue 1.40e-71
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS22714.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 291.0
  • Bit_score: 275
  • Evalue 6.70e-71

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGTTTGCCGTGGTCGCCGAAGAGGGCAGCCTGACTCGCGCGGCGGTGCATCTGGACAGCGACGTCGCCGCATTGAGCCGTCAGATCAGCGCCCTTGAACAACAATGCGGAACGCGCCTGTTCAATCGGACCGGCCGTGGCGTGAGCCTGTCCGAAGCCGGTTTGCGGATTTATCCGCAGGTCCAGGCGCTGTTGGCGGAAGCGTCGCTGCTTGAAGAGACGATACGCGAGCAGGCCGATGTGGTAAGAGGCAGCGTGACGCTGGTCATGATGCCGTCCATCGCGGCCACGCTCGTGGGGCGGGTATTTACCGTGCTGCGTGATACGCATCCCGACGTCCATATCAAGGTCATGGAAGGGGCCAGCGGCAAAGTCGTCGAATGGCTCGCCGATGGGCGTGCCGACATCGGCCTGCTCTATCGCTACAAGCTTCCTTTGCCGAGGGGGGAAGAAGCGCTCGCAAGCGTCGACGCCCACCTTGTCGGGCCGCCCGGAGACCGTGCCACCGCCAATGAAACGGTGGATTTTCGTGCGCTGGCGTCCGTGCCTCTGGTGCTGCCCAGCTATCCCAATGGTCTGCGGCGCGAGCTGGATACCCTTGCGCGGACCGCGGGCATCGTGCTTGCGCCCGTGCTGGAGTCGGAATCCCTGGCGCTATTGAAGTCATTGGCGATGAATCACGGACTCAATGTGGTTCTTTCCGTTCACGCCATCGAAGAAGAGCTGGCCGCAGGGAAGCTCCAGGCCTCGCGTATCGTCGGTCCGAGCGTCAGGTCCACCATTTCCATAGCCTTTGGCAAGGCGAAATCCCCGGGGCGTGCGGTCGAACTGGTATCGCGCAGCATTCGCCGGCTCTTGACGGAAGTCGTGCACGAGCCGCCCCTGGGGAATCGACCTCATGGACAGAGCGCTCGGTCTTGA
PROTEIN sequence
Length: 307
MFAVVAEEGSLTRAAVHLDSDVAALSRQISALEQQCGTRLFNRTGRGVSLSEAGLRIYPQVQALLAEASLLEETIREQADVVRGSVTLVMMPSIAATLVGRVFTVLRDTHPDVHIKVMEGASGKVVEWLADGRADIGLLYRYKLPLPRGEEALASVDAHLVGPPGDRATANETVDFRALASVPLVLPSYPNGLRRELDTLARTAGIVLAPVLESESLALLKSLAMNHGLNVVLSVHAIEEELAAGKLQASRIVGPSVRSTISIAFGKAKSPGRAVELVSRSIRRLLTEVVHEPPLGNRPHGQSARS*