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scnpilot_p_inoc_scaffold_11787_2

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: comp(841..1314)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding region RNP-1 (RNA recognition motif) n=1 Tax=Prochlorococcus marinus (strain NATL2A) RepID=Q46I49_PROMT similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 159.0
  • Bit_score: 100
  • Evalue 1.90e-18
RNA recognition motif-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 159.0
  • Bit_score: 100
  • Evalue 5.20e-19
RNA-binding region RNP-1 (RNA recognition motif) {ECO:0000313|EMBL:AAZ58829.1}; TaxID=59920 species="Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.;" source="Prochlorococc similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 159.0
  • Bit_score: 100
  • Evalue 2.60e-18

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Taxonomy

Prochlorococcus marinus → Prochlorococcus → Prochlorales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 474
TTGCTAGACGGCCATACGTTCAACGACCGTGCCATCAAGGTCACCTCGAAGCGCAGCAACGTCCCGCGCCACCGCCTCCCGCGCGGCGGCGCCGCGGCCGGCGGCTCCCCCAGCCACCGCGGCGGCGGCGGCCGCGGCGGCATGGGCACTCCGCGCGGCGGCCGCGGCGGCCGCGGCGGCGCGCGCGGCGGCTACGGCGGCGGCTACGGCGCGGGCGCGGCGGGCGGCATGATGATGCCGATGTACCACCCGCAGATGGGCATGGTGATGCCCGTTCCCATGCACATGATGCAGGGCATGGGCGCCATGGGCGGCTACGCGCCCATGCACGGCCACGGCCAGGGCCAGGACGGCCAGCAGGGCGGCGGCAGCGGCGGCCAGCGCGGCGGCCGCGGCGGCTACGGCGGCCGCGGCGGGTATGCGGGCCGCGGCAACCCCCGCGGCGGCGCGGGCAACCGCTACCAGCCGTACTAA
PROTEIN sequence
Length: 158
LLDGHTFNDRAIKVTSKRSNVPRHRLPRGGAAAGGSPSHRGGGGRGGMGTPRGGRGGRGGARGGYGGGYGAGAAGGMMMPMYHPQMGMVMPVPMHMMQGMGAMGGYAPMHGHGQGQDGQQGGGSGGQRGGRGGYGGRGGYAGRGNPRGGAGNRYQPY*