ggKbase home page

SCNpilot_cont_300_bf_scaffold_1919

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1919_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142..1344
-----------------
DNA (1203bp)
protein (401aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEN6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26834.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1919_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1521..5012
-----------------
DNA (3492bp)
protein (1164aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4NY91_9CAUL rbh
Helicase {ECO:0000313|EMBL:KIZ39787.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
protein kinase-like domain-containing protein
SCNpilot_cont_300_bf_scaffold_1919_3
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5009..6769
-----------------
DNA (1761bp)
protein (587aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 PF36_9CAUL">RepID=V4PF36_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ86731.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis b
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein
SCNpilot_cont_300_bf_scaffold_1919_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6730..7590)
-----------------
DNA (861bp)
protein (287aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PMP0_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KIZ39788.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1919_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7816..8157
-----------------
DNA (342bp)
protein (114aa)
Transcriptional regulator AbrB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QEZ8_NITHX
regulator PrlF
Transcriptional regulator AbrB {ECO:0000313|EMBL:ABE65199.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ha
SCNpilot_cont_300_bf_scaffold_1919_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8154..8657
-----------------
DNA (504bp)
protein (168aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QEZ9_NITHX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE65198.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1919_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8759..8947
-----------------
DNA (189bp)
protein (63aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK08_OLICO
Uncharacterized protein {ECO:0000313|EMBL:CEG10430.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1919_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9178..9531)
-----------------
DNA (354bp)
protein (118aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BRA2_OLICM
Uncharacterized protein {ECO:0000313|EMBL:CEG10429.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1919_9
unknown

Not on your lists

9908..10069
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1919_10
Bradyrhizobium sp. DOA9, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10091..11017)
-----------------
DNA (927bp)
protein (309aa)
ArdC gene in pSa(IncW plasmid)-like n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFD2_NITHX rbh
Hypothetical 34.2 kDa protein y4eC {ECO:0000313|EMBL:GAJ37456.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyr
ArdC gene in pSa(IncW plasmid)-like rbh
SCNpilot_cont_300_bf_scaffold_1919_11
unknown

Not on your lists

11249..11359
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1919_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11308..11895)
-----------------
DNA (588bp)
protein (196aa)
ArgG gene in streptomyces clavuligerus-like n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFD3_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KIZ36387.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1919_13
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12203..12613)
-----------------
DNA (411bp)
protein (137aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EUR8_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ39912.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
SCNpilot_cont_300_bf_scaffold_1919_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12610..12861)
-----------------
DNA (252bp)
protein (84aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFD5_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KIZ36384.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1919_15
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12858..13061)
-----------------
DNA (204bp)
protein (68aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CDK2_METED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAX24280.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
SCNpilot_cont_300_bf_scaffold_1919_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13124..13657)
-----------------
DNA (534bp)
protein (178aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK14_OLICO
Uncharacterized protein {ECO:0000313|EMBL:ETR79480.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1919_17
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13815..14291)
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EUR4_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ39908.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
SCNpilot_cont_300_bf_scaffold_1919_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14384..16060)
-----------------
DNA (1677bp)
protein (559aa)
Chromosome partitioning protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK27_OLICO rbh
Plasmid partitioning protein {ECO:0000313|EMBL:KIZ36380.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomo
ParB-like domain-containing protein
SCNpilot_cont_300_bf_scaffold_1919_19
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16314..17654)
-----------------
DNA (1341bp)
protein (447aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EUQ8_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ39902.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
SCNpilot_cont_300_bf_scaffold_1919_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17701..19140)
-----------------
DNA (1440bp)
protein (480aa)
N-6 DNA methylase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK28_OLICO
Modification methylase TaqI {ECO:0000313|EMBL:CEG10578.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc
N-6 DNA methylase
SCNpilot_cont_300_bf_scaffold_1919_21
unknown

Not on your lists

19373..19705
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1919_22
unknown

Not on your lists

20582..21052
-----------------
DNA (471bp)
protein (157aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1919_23
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21328..21843)
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK29_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08336.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_cont_300_bf_scaffold_1919_24
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21971..22645
-----------------
DNA (675bp)
protein (225aa)
Tiorf44 protein n=1 Tax=Rhizobium radiobacter RepID=Q9R6L5_RHIRD
Tiorf44 protein {ECO:0000313|EMBL:BAA87669.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1919_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22549..23475)
-----------------
DNA (927bp)
protein (309aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JK70_OLICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ36521.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1919_26
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23679..23855)
-----------------
DNA (177bp)
protein (59aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK71_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08333.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_cont_300_bf_scaffold_1919_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24062..25099
-----------------
DNA (1038bp)
protein (346aa)
transposase IS110 n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003667269 rbh
Transposase IS116/IS110/IS902 {ECO:0000313|EMBL:EHK55637.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
Transposase
SCNpilot_cont_300_bf_scaffold_1919_28
unknown

Not on your lists

comp(25759..26304)
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1919_29
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26485..26730
-----------------
DNA (246bp)
protein (82aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8G7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:ETR79416.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1919_30
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26743..27447)
-----------------
DNA (705bp)
protein (235aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK32_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI08326.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
Displaying items 1-30 of 41 in total

View Taxonomy