ggKbase home page

SCNpilot_cont_300_bf_scaffold_3429_15

Organism: SCNpilot_cont_300_bf_UNK

megabin RP 54 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: 8002..8682

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP25_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 226.0
  • Bit_score: 387
  • Evalue 1.10e-104
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 226.0
  • Bit_score: 387
  • Evalue 3.10e-105
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ADU42471.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 226.0
  • Bit_score: 387
  • Evalue 1.50e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGCGGTCCCGTGTCATCATCGCGCTCAAAGCCTCTATTCCTTTGTTCGCGGAAAAGCCGTCTCATTCTTTCGTCCCGCTCGACCACACGTCGGCCGGCGCGCGCAGCGAAGGTCAGGGGCGGCCTCCGGCCGGCGCTTCGCGCGCACCCTTGACCGCAGCGAGCACGCTGGCAGGCTGGCGGTTCGGCGGAGAAAGGCGGGCATGGCGCTATGCCATTATCCTGATCGCTGGCGCGCTCGCGCTCGGCGCAGGACCGGCGACGACCTTGGCGCAGTCCGCGCCCGTTGCGCGCACGGTTGCCGCCGATCCGCATGGCGGTCATATCGCCGAGGCGTCGCAGCGCTTCGGCATTCCCGAGCACTGGATTCGCGCCGTGCTGCGCGCCGAGAGCGCGGGCGACGTGCGTGCGATCTCATCAGCCGGCGCGGTCGGGCTCATGCAGGTCATGCCCGATACCTGGGCGGGCCTGCGCGTCCGCTATCATCTCGGCCGCGATCTCTACGATCCGCGCGACAACATCCTCGCAGGCATCGCTTATCTGCGCGAGATGTGGGATCGCTATGGCAATGTCGCGGCGATGCTCGCCGCCTACAATGCCGGTCCCGGCCGCTATGACGATCATCGCGCGACCGGCCGTGCGTTGCCCGCCGAGACCCGCGCCTATGTCGCCGCGCTGTGA
PROTEIN sequence
Length: 227
MRSRVIIALKASIPLFAEKPSHSFVPLDHTSAGARSEGQGRPPAGASRAPLTAASTLAGWRFGGERRAWRYAIILIAGALALGAGPATTLAQSAPVARTVAADPHGGHIAEASQRFGIPEHWIRAVLRAESAGDVRAISSAGAVGLMQVMPDTWAGLRVRYHLGRDLYDPRDNILAGIAYLREMWDRYGNVAAMLAAYNAGPGRYDDHRATGRALPAETRAYVAAL*