ggKbase home page

SCNpilot_expt_300_bf_scaffold_87_9

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(9264..10454)

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane proteins containing uncharacterized repeats-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAD1_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 285.0
  • Bit_score: 239
  • Evalue 6.40e-60
Uncharacterized protein {ECO:0000313|EMBL:KIO48155.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 324.0
  • Bit_score: 205
  • Evalue 1.40e-49
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 279.0
  • Bit_score: 195
  • Evalue 2.30e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1191
GTGAAAATAATCCCTGGATTCAATCTCCGCTGGTTTCTCCTTGCCGCCGCGTTCTTCGCCGGACTGGGCGGACTGGGTTTTGGCAGTCATGCCTCGGCGCAATACGTAGACCAAGCTTATCTCATAGACCTGAATAGCAGGACGGCAACCAAGCTGGGCGCGTTCAGCGGTTATTCAGGTCATGCTTCGGGTATCAACGATGCCGGGCAGGTGGTGGGATCTTCCACTACGGCCGCGGGTCAGAGTCACGCATTCATCACGGGCCCCAACGGCGCGGGCATGAGAGACCTGGGGACACTGGGTGGGGATTCCAGTTATGCTGTTGCCATCAATGCATCCGGACAGGTGGCGGGGGTTTCTGCCACGTCTACCGGCACCCATGCCTTTATCACCGGCCCCAATGGCGTAGGCATGAGAGACCTGGGCGTGCCTGGGGGGTTTTCTTATAGTGGAGTTTATGACATTAACGATACTGGACAGGTATTGGGATATTTCGGTATCGGCAACAACCAGAGGCATGCGTTCATCACCGGCCCCAATGGCGTGGGCATGACCGACCTTGGCATAGTGGGTGAGAATTCCAGTTTAGAGGGTGAGGATTCCACCTATGTGGCCCTCAACGGGTCCGGCCAGGTGGTGGGATCTACCCTGGGCAGCGACCTGCAGCAGCACGCCTTCATTACTGGCCCCAACAGTGTGGGCATGAAAGACCTAGGTGCACTGTACCCGCCCGTCAACGATTACAGCGAGGCTCATGCCGTCAACGATGCCGGGCAGGTAGCGGGGAGCGCATGGGCGTCGGAGGGAATCATACCGCATGCCTTTATCACCGGCCCTGACGGAGTGGGCATGAGAGATCTTGGCACATTGGCCGGGACGGATTGGAGTGGCAGCGAAGCTCATGCCATCAACGAGGCCGGGCAGGTGGCAGGCGAGTCCGACGGACATGCTTTCATCACTGGCTCCAACGGGGCAGGCATGATCGACCTCAATTCGCTGGCCGACCTGCCAAAGGGGGTGATCCTGGTTAATCCCATAGCCATCAATAACGTAGGCCAAGTCATTGCCTACGGCTACATTACCGTTGTTCCGGAACCGGAGAGCTACGCGCTGCTGCCTGCTGGCCTGGCCCTCCTCGCAGCGCTCGTTCACCGGAAAAAAGGCGCCAGCCTGCTTCCGGCTCCATCCTGA
PROTEIN sequence
Length: 397
VKIIPGFNLRWFLLAAAFFAGLGGLGFGSHASAQYVDQAYLIDLNSRTATKLGAFSGYSGHASGINDAGQVVGSSTTAAGQSHAFITGPNGAGMRDLGTLGGDSSYAVAINASGQVAGVSATSTGTHAFITGPNGVGMRDLGVPGGFSYSGVYDINDTGQVLGYFGIGNNQRHAFITGPNGVGMTDLGIVGENSSLEGEDSTYVALNGSGQVVGSTLGSDLQQHAFITGPNSVGMKDLGALYPPVNDYSEAHAVNDAGQVAGSAWASEGIIPHAFITGPDGVGMRDLGTLAGTDWSGSEAHAINEAGQVAGESDGHAFITGSNGAGMIDLNSLADLPKGVILVNPIAINNVGQVIAYGYITVVPEPESYALLPAGLALLAALVHRKKGASLLPAPS*