ggKbase home page

SCNpilot_expt_300_bf_scaffold_1307_1

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 2..397

Top 3 Functional Annotations

Value Algorithm Source
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DS33_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 131.0
  • Bit_score: 129
  • Evalue 1.80e-27
Glycosyl transferase {ECO:0000313|EMBL:KIO48891.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpA similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 129.0
  • Bit_score: 134
  • Evalue 1.40e-28
glycosyl transferase family protein similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 128.0
  • Bit_score: 124
  • Evalue 1.70e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
TCGCTGCTGATAGGGTCGGTGTCGCATCTGGTGCCGCTGCCTGTTCCACTGATCGCCTACCGCCAGCACAGCGCCAACCAGATCGGAATACCCAGGCGGGGCTGGCGCAACCGGCGCAAGCGGCACGGCGGAAGCTTTGCGCTCTTGTATGGCCCGGCGCTTCGCTGTTTTGAAGCGTTGCGGGAAAGGCTGCTGAAATTCGGTGGCCGCTTTCCGCAATCAGAACGCCATCTCAGCCGCCTGGATGCCAAGCTCGTTTTTTTACGCGCTCGTTGCGGGCTACCGCTAAAACGATGGCGCCGCCTGCCGGGTGCGATGCATGAACTGGTGACGCTCCGTTATCATCGTTATGCAAAAGGCATTGTGAGCTTTTTTGGCGATCTATGGCAGAGTTGA
PROTEIN sequence
Length: 132
SLLIGSVSHLVPLPVPLIAYRQHSANQIGIPRRGWRNRRKRHGGSFALLYGPALRCFEALRERLLKFGGRFPQSERHLSRLDAKLVFLRARCGLPLKRWRRLPGAMHELVTLRYHRYAKGIVSFFGDLWQS*