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SCNpilot_expt_300_bf_scaffold_828_6

Organism: SCNPILOT_EXPT_300_BF_Armatimonadetes_55_9

near complete RP 49 / 55 MC: 19 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(3596..4699)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYQ6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 368.0
  • Bit_score: 309
  • Evalue 4.70e-81
  • rbh
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 360.0
  • Bit_score: 429
  • Evalue 8.80e-118
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 360.0
  • Bit_score: 429
  • Evalue 4.40e-117

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Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1104
ATGCCAGTAGAAAATGGGTTAGCAACACCGCCGCGAAGAGGCCGCGCGATCACCGTTCGCACTCCCGGCCGACATTCCTTTGCGGAAGCCAGCGCCAACCCGCTCCTGGAGGATCCGCAAGCGGAACCCGCTGAAGACGATCTTCTTGCTCTTGCCGATGCAGAGGAGGAGACCGAGGAAGGCGAAGAGGAATCCCGTACCCATGATGACTCGGAAGAGCTCGAAATGTGGATGCGGCAAACCCGCCGCGCTTCGCTGCTGACGCCAGAACAGGAAGTGCACCTTGCGGTGCGCGTTATGGCGAAGGAACTGGCCGACAAGGGCAAAAATGCTGAGTTGCTCCGCCTTCTGCAAAGAAGTGAGCTTGCTCACATGGGCCGCCCTAAAGAACTTACCACGATGGTTCTCCGACGCATCGAGTCGGAGGGTATGGAAGCAAAGCGACACCTGATCGAATCTAACCTACGATTGGTTGTCAGCATTGCTAAGAAGTACAACGCGAGAGGTATCCCGCTTGCCGATCTGATTCAAGAAGGCAACCTGGGTCTTATTCGCGCCGTCGAGAAGTTCGACTGGTCGAAAGGTTTCCGATTCAGCACCTATGCGACTTGGTGGATTCGCCGAGCGATTGCTCGTGCGATCATCAATCAGGGTCGAACGATTCGTATCCCCGTTTATGTCGCGGAACTCATCAACAAGGTCGTCAAGACCGCTTCCCGCTTGCAGCAAGAGCTTCAGCGAGAGGCAACCGAAGAAGAGATCTCCCGAGAGGTTGGCCTCTCCGTCGACCGCGTTCGTGAAATGATGCGCGTGGCGGTTGAGCCGATTTCCTTGGAGACGCCGGTTGGCGAAAAGGAGACGCTTATTCGACGCGAGGAGATCGACGGCATTCTCGGTCGTTTGACGAGCCGAGAGCGAGACGTCGTTCGACTTCGATTCGGGCTGGATGACGGTCGGTCTCGAACCTTGGAAGAGGTCGGTAGCGAGCTTAACGTTACTCGCGAGCGCGTTCGTCAGATCGAGCTTCGAGCGATGAAGAAGCTTCGCCATATCGGGCAAGAGCTCTCTTCCCAGGGCTTCACCATTACGCCTACTCCGAGCTAA
PROTEIN sequence
Length: 368
MPVENGLATPPRRGRAITVRTPGRHSFAEASANPLLEDPQAEPAEDDLLALADAEEETEEGEEESRTHDDSEELEMWMRQTRRASLLTPEQEVHLAVRVMAKELADKGKNAELLRLLQRSELAHMGRPKELTTMVLRRIESEGMEAKRHLIESNLRLVVSIAKKYNARGIPLADLIQEGNLGLIRAVEKFDWSKGFRFSTYATWWIRRAIARAIINQGRTIRIPVYVAELINKVVKTASRLQQELQREATEEEISREVGLSVDRVREMMRVAVEPISLETPVGEKETLIRREEIDGILGRLTSRERDVVRLRFGLDDGRSRTLEEVGSELNVTRERVRQIELRAMKKLRHIGQELSSQGFTITPTPS*