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SCNpilot_expt_300_bf_scaffold_828_16

Organism: SCNPILOT_EXPT_300_BF_Armatimonadetes_55_9

near complete RP 49 / 55 MC: 19 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 18142..18693

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 181.0
  • Bit_score: 305
  • Evalue 6.20e-80
DNA-directed RNA polymerase subunit beta' n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EX29_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 196.0
  • Bit_score: 155
  • Evalue 7.40e-35
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 181.0
  • Bit_score: 305
  • Evalue 1.20e-80

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Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGCTCCGTAAGCGTCAGGTGAAGGAGCCGGGCGACACGCCGTTCCTTCCGGGACAGATCGTCGACCGATTCACCTTCCAAGCGGCCAACGATAACGTTCGAAAGCTTCTCGCCGAAGGCAAGACGATCAAGTACGTCGACCCGATCACCGGCGACAACGTTGAGCGAGATCCGAAGGAAGCCACCGCGACCTGGATTCTCCTCGGTATCACCGAGGCATCCTTGGCCACCGACTCCTTCCTCTCCGCCGCATCGTTCCAAAAGACCACCAGGGTTCTTACGGAAGCCGCGGTTCGAGGAAAGAAGGATCAACTCGTTGGTCTGAAGGAGAACGTCATCATCGGTCGCTTGATCCCATCAGGTACGGGCGTCAAGCAATACCGAGACGTGGCGGTCGATGTCCAGCGTGGTCCGGCATGGGCCGAGCAGTCGCTCACCGCACTCGTTGAGGCGGATGAGCACGAGTTGGACGATCCGCTGAGCGCTCTGGCGTTCCCGTCGCTCGCCGAGATGGCCGCGTCGGATGATATGTTCGACGAAGACGAAGAGTAG
PROTEIN sequence
Length: 184
MLRKRQVKEPGDTPFLPGQIVDRFTFQAANDNVRKLLAEGKTIKYVDPITGDNVERDPKEATATWILLGITEASLATDSFLSAASFQKTTRVLTEAAVRGKKDQLVGLKENVIIGRLIPSGTGVKQYRDVAVDVQRGPAWAEQSLTALVEADEHELDDPLSALAFPSLAEMAASDDMFDEDEE*