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SCNpilot_expt_300_bf_scaffold_3318_5

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 2576..3007

Top 3 Functional Annotations

Value Algorithm Source
Lamin Tail Domain domain and Intermediate filament protein family and Intermediate filament, ifa/ifb family-containing protein {ECO:0000313|EMBL:CEF70969.1}; TaxID=34506 species="Eukaryota; Metazoa; E UNIPROT
DB: UniProtKB
  • Identity: 24.8
  • Coverage: 141.0
  • Bit_score: 62
  • Evalue 4.20e-07

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Taxonomy

Strongyloides ratti → Strongyloides → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 432
ATGGATAATGATTTTAATAATGAAGACTATATTCAAACTAAAACACTCTTTCAACGTCATTCAAAAGGTCCTGTTATGTTCAATGGTTGTTCACCGTTAGGCGATGTAATCATCCTTGATAATGTAAGTCCACTGAAATCATACGATTTAACTGGATGGTATATCGAACGACAAACTGATTCACATCCGTATCTTCGTTATACATTCACTGATCAATTAATAATTCCGCCATTGACAACGATTGAACTCTGGTCAAGTACATCAACTCCTCAATCAAATGAAAACAATGATCAACAAGCTTATGCAACGATCAAAACGAAAGTTTCAACGTGGAATACAGCTGAACAATGGAGTATCAATCGACTTTTCAATTCCCATGGACGTGAAAAAGCGATTTTTTCTCATCGAATATTGATGCCAAGCGAAGAATAA
PROTEIN sequence
Length: 144
MDNDFNNEDYIQTKTLFQRHSKGPVMFNGCSPLGDVIILDNVSPLKSYDLTGWYIERQTDSHPYLRYTFTDQLIIPPLTTIELWSSTSTPQSNENNDQQAYATIKTKVSTWNTAEQWSINRLFNSHGREKAIFSHRILMPSEE*