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SCNpilot_expt_300_bf_scaffold_1183

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1183_1
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..611
DNA (609bp) protein (203aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0VLC9_MYCFO
Short-chain dehydrogenase {ECO:0000313|EMBL:CDP84800.1}; TaxID=1802 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
short-chain dehydrogenase
SCNpilot_expt_300_bf_scaffold_1183_2
Mycobacterium fortuitum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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770..1378
DNA (609bp) protein (203aa)
TetR family transcriptional regulator n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0V496_MYCFO
TetR family transcriptional regulator {ECO:0000313|EMBL:EJZ09643.1}; TaxID=1214102 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium fortui
TetR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1183_3
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1803..2795
DNA (993bp) protein (331aa)
YhdH/YhfP family quinone oxidoreductase n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0UPN6_MYCFO rbh
putative quinone oxidoreductase
Putative quinone oxidoreductase {ECO:0000313|EMBL:AHH19197.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
SCNpilot_expt_300_bf_scaffold_1183_4
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2808..4016
DNA (1209bp) protein (403aa)
Alcohol dehydrogenase zinc-binding domain-containing protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F9F2_9NOCA rbh
Putative zinc-binding dehydrogenase {ECO:0000313|EMBL:AHH22034.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
putative zinc-binding dehydrogenase rbh
SCNpilot_expt_300_bf_scaffold_1183_5
Mycobacterium immunogenum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4087..4632
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0UJG7_MYCFO
hypothetical protein
Um strain SMUC14 PROKKA_contig000006, whole genome shotgun sequence {ECO:0000313|EMBL:KIU41059.1}; TaxID=83262 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;"
SCNpilot_expt_300_bf_scaffold_1183_6
uncultured gamma proteobacterium HF4000_36I10, Gammaproteobacteria, Proteobacteria, Bacteria

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4672..5037
DNA (366bp) protein (122aa)
Lactoylglutathione lyase and related lyases n=1 Tax=uncultured gamma proteobacterium HF4000_36I10 RepID=E0XWH4_9GAMM
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:ADI18765.1}; TaxID=710989 species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteo
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1183_7
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5112..5858
DNA (747bp) protein (249aa)
Short-chain dehydrogenase n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0UJH0_MYCFO
Oxidoreductase {ECO:0000313|EMBL:CDP84758.1}; TaxID=1802 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1183_8
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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5925..6776
DNA (852bp) protein (284aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EAW30169.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EAW30169.1};; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="ma
Enoyl-CoA hydratase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YGE3_9GAMM rbh
enoyl-CoA hydratase/isomerase family protein
SCNpilot_expt_300_bf_scaffold_1183_9
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7090..7782
DNA (693bp) protein (231aa)
Protein tyrosine/serine phosphatase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V449_SPHWW
protein tyrosine/serine phosphatase
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:ABQ67065.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingom
SCNpilot_expt_300_bf_scaffold_1183_10
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8087..8599)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0UG59_MYCFO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH19171.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
SCNpilot_expt_300_bf_scaffold_1183_11
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8796..11549)
DNA (2754bp) protein (918aa)
TonB-dependent receptor n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C0B8_HYPNA
TonB-dependent receptor {ECO:0000313|EMBL:KCZ97616.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorp
TonB-dependent receptor
SCNpilot_expt_300_bf_scaffold_1183_12
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12018..12932)
DNA (915bp) protein (305aa)
peptidase n=1 Tax=Marinobacterium stanieri RepID=UPI0002559ED4
Flavin reductase-like, FMN-binding protein {ECO:0000313|EMBL:KGB56770.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sou
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1183_13
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13000..13806)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002FC5CB6
enoyl-CoA hydratase/isomerase rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEG50915.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
SCNpilot_expt_300_bf_scaffold_1183_14
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13941..14243)
DNA (303bp) protein (101aa)
signal peptide protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E30A
Uncharacterized protein {ECO:0000313|EMBL:EDL47741.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
Displaying 14 items

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