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SCNpilot_expt_300_bf_scaffold_698_18

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 26582..27763

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KHL8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 385.0
  • Bit_score: 554
  • Evalue 1.20e-154
  • rbh
RND transporter MFP subunit {ECO:0000313|EMBL:AJR23456.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 392.0
  • Bit_score: 559
  • Evalue 5.10e-156
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 393.0
  • Bit_score: 542
  • Evalue 7.60e-152

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Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGGCTGACATGTCCGATATGCCCCCGCCGGCCGCCGCCGGCCCCAGCCCGCGCACGTTGAAGCGAGTCGGCATCGCCGCCGGCATCGCCGCGATCGCCATCGCCGGCGTGGGCATCGCCACCCGCATCAGCGCCACCGGCGACCTGAAGCAGGTCGCGGCGGAGGCGGCGGTCCCCACCGTCGCGGTCGTCCGTCCGGCCAGCGGCGGCGCGGGCGACGCGCTCGTCCTGCCGGGCAACGTGCAGGCGCTGAACAGCGCGGCGATCTACGCGCGCACCAACGGCTATGTCCGGCGCTGGCTCGCCGATATCGGCGACCACGTCCGCACCGGCCAGCCGCTCGCGATCCTCGACGCGCCGGAGATCGACCAGCAGCTCGCGCAGGCCACCGCCGATTACCAGACCGCGCTCGCCAACCAGAAGCTCGCCGCCACCACCGCGCAGCGCTGGTCGACGATGCTGGCGAAGGATGCGGTGTCGCGGCAGGAGGCGGACGAGAAGGCCGGCGACCTCGCCGCCAAGTCCGCGCTCGCCAATGCCGCGCTCGCCAACGTCCGGCGATTGCGCGCGCTGCAGGGCTTCACTCGCCTCTACGCGCCGTTCAACGGCGTGGTCACGAGCCGCTCGGCGCAGATCGGCCAGCTCGTCGTCGCCGGCAATGCTGCGTCGCAGCCGCTGTTCACCGTCTCCGACGCCAGCCGCGTGCGCGTGTTCGTGCGCGTGCCGCAGGGCGCTTCGGCGGAGGTGCATCCGGGGATGACCGCGACGCTCTCGCTGCCCGAATATCCGCGCCGCACCTTCCCCGCGACGATGACGCGCAGCGCGCAGGCGGTGGACGAGAAGGCCGGCGCGGTGCTGGTCGAGCTGCAGGCGCCCAATCCCGACGGCGCGCTGAAGCCAGGCGCCTTCGCGCAGGTATCGTTCAGGACCGGCGCGGGCGGCGGCAACACGCTGAGCCTGCCCGGCAGCACGATCATCTACAGCAACGACGGCCCGAGCGTGGCGGTGGTCGACGCGCGCGGCCGCGTGACGGTGAAGCCGGTGACGATCGCGCGCGACGAGGGCAAGACGGTCGCCGTCTCGCAGGGCGTCACCCTTGCCGACCGGGTGGTGGACAGCCCGCCGGACGCGATCCGCAGCGGCGATCAGGTGCGCGTGCGGGCTGCGTCGAATGGCGACTGA
PROTEIN sequence
Length: 394
MADMSDMPPPAAAGPSPRTLKRVGIAAGIAAIAIAGVGIATRISATGDLKQVAAEAAVPTVAVVRPASGGAGDALVLPGNVQALNSAAIYARTNGYVRRWLADIGDHVRTGQPLAILDAPEIDQQLAQATADYQTALANQKLAATTAQRWSTMLAKDAVSRQEADEKAGDLAAKSALANAALANVRRLRALQGFTRLYAPFNGVVTSRSAQIGQLVVAGNAASQPLFTVSDASRVRVFVRVPQGASAEVHPGMTATLSLPEYPRRTFPATMTRSAQAVDEKAGAVLVELQAPNPDGALKPGAFAQVSFRTGAGGGNTLSLPGSTIIYSNDGPSVAVVDARGRVTVKPVTIARDEGKTVAVSQGVTLADRVVDSPPDAIRSGDQVRVRAASNGD*