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SCNpilot_expt_300_bf_scaffold_631_6

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(5017..6414)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB50D similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 465.0
  • Bit_score: 683
  • Evalue 1.20e-193
  • rbh
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 466.0
  • Bit_score: 683
  • Evalue 5.60e-194
Transcriptional regulator {ECO:0000313|EMBL:AIT06895.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 466.0
  • Bit_score: 683
  • Evalue 2.80e-193

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1398
ATGGCGCGGGACAAATTGCTGGCCGGTCACGCGGTGCGGCGGCTCAGGCGGCGCACCGGGCTGACGCAGGCGGCGATGGCGGAGATGCTGGCGATCTCGCCGAGCTACCTCAACCTGATCGAGCGCAACCAGCGCGCCTTGCCGGCCGCGCTGCTGGTGAGAATGGCCGAGCAGTTCGATTTCGATCCGCGCGCGCTGGCGGCGGGCGAGCCGGGCGGCGGCGCGGCGGCGATCCGGCGGCGGCTCGCCGATCCGCTGTTCGCCGATCTCGAGATCGACCGGCACGAGGTGGAGGAATGGCTCGCCGCCGCGCCGGGCGGGGCGGAGGCGTTCGCGCGCGCCTTCGATCGCGCCGGCGGCGGGGCGTCGTCGGGCGAGGGGCGCGACGATGCGATGACCGCGGTGCGCCGCGAGATCGAACGCTGGCGCAATCACTTCCCCGATCTCGACGCGGCGGCGGAGGCGCTGGCGGACGAATTGCGGCTGGTCGGCGCCGACCTTTACGCCGCGCTGGTCGAGCGGCTGCGCGTCAAGCACGGCCTGTCGATCCGCATCCTGCCGATCGATGTGATGCCCGATCTGCTGCGCCGGCTCGACCTTCACGCGCGGCAGTTGCAGCTGAGCGAGACGCTCGATCCGCCCGCGCGGACCTTTGCGCTGGCGGCGCAACTCGCGCAGCTCGAGGCGCGGGCGGAAATCGACGCGCTGGCGCGGGGCGCGGGGCTGGCCGATCGCAACGCCGAGCGATTGTTCCGCCGCCATCTCGCGAGCTATTTCGCGGCGGCGGTGATGATGCCCTATGCCCGCTTCCTGCGCGCGTGCGAGGCGACCGGCTATGACGTGAGCGTGCTCGAACGCCGCTTCGGCGCGAGCTTCGAGCAGGTCGCGCATCGGCTGACGACGCTGCAACGCGTCGGCGCGCGCGGCCTCGCCTTCTTCATGATCCGCATCGACCGCGCCGGGCAGGCGTCGAAAAGCTATGCCGGGGCGAGCGCCGCGCCGCTGGTGCAGGCGCAGGGGCGCTGTCCGCTGTGGCGGCTCCACCACGCCTTCGACCGGCCGGGAGCGCTGGCGGTGCAACTGGTCGAGCTGGAGGACGGCACCCGCTGGTTCTCACAGGCGCGCACCACCGGCGCGCCGGGCAGCCGGCCGGACGCCGCGCCGCACGAGGTGGTGGCGGAATTCGCGGTCGGTCTGGGCGTCGCGGCGGAGCAGGCCGGGAACCTCGCCGCCGCGCGCGGGCTGGACCTGAGCGGCACCGCCACGCCGATCGGCCTCGGCTGCCGCGCCTGCCTGCGCGCCGCCTGCCCGCAACGCTCCGCCGCGCCGGATGGGCGGGCGCTGCTCGTCAACGATCGCGAGCGCGGGCTATCCGCGCTCAGCTTCGCGGAGGATTGA
PROTEIN sequence
Length: 466
MARDKLLAGHAVRRLRRRTGLTQAAMAEMLAISPSYLNLIERNQRALPAALLVRMAEQFDFDPRALAAGEPGGGAAAIRRRLADPLFADLEIDRHEVEEWLAAAPGGAEAFARAFDRAGGGASSGEGRDDAMTAVRREIERWRNHFPDLDAAAEALADELRLVGADLYAALVERLRVKHGLSIRILPIDVMPDLLRRLDLHARQLQLSETLDPPARTFALAAQLAQLEARAEIDALARGAGLADRNAERLFRRHLASYFAAAVMMPYARFLRACEATGYDVSVLERRFGASFEQVAHRLTTLQRVGARGLAFFMIRIDRAGQASKSYAGASAAPLVQAQGRCPLWRLHHAFDRPGALAVQLVELEDGTRWFSQARTTGAPGSRPDAAPHEVVAEFAVGLGVAAEQAGNLAAARGLDLSGTATPIGLGCRACLRAACPQRSAAPDGRALLVNDRERGLSALSFAED*