ggKbase home page

SCNpilot_expt_300_bf_scaffold_658_3

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(1049..1999)

Top 3 Functional Annotations

Value Algorithm Source
FecR family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QV64_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 309.0
  • Bit_score: 201
  • Evalue 9.10e-49
transcriptional regulator; K07165 transmembrane sensor Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.1
  • Coverage: 309.0
  • Bit_score: 208
  • Evalue 1.80e-50
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 311.0
  • Bit_score: 196
  • Evalue 8.30e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Sphingopyxis_65_20 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGAGCGTAAGCGACCAGCATAATGCCGACGATGAGGCGGCCCTTTGGATATCCAGGCTGCAATCGCGCAGCGTCTCGACGCACGACCTCGCCGATTTCGCGCGCTGGCGCCGAAACCCGAACAACGCCGAGGCCTATGCACGCGCTGAAGCGTTTTGGGACTCAAGCGGAAGGCTCAGCTCAGATCCCGATATTGCGGCCGCTATAAACCGCGCACAGAACACGCGCCGCAGGCCCGTTTGGCACCGCTTTGCGATGCCGGCGCTAGCGCTGGCATCGGCGGCGGCCGCCATACTGCTGTTTTTCAGCGGCGGGCTCGTCACCACTCCAACCGAGCATTACACGACGATCGCCGGTGAGCGCTCGGTGCTCCGCCTGGATGACGGAACGCGGGTCCAGCTTGATACGGACTCCGGCATCAGCACGGCATTCACCTCTCGCGACCGGGAAGTGTCGCTCACAAAGGGACGGGCCTATTTCGAGGTCCGGCACGACGCACGCAGGCCGTTCGTTGTGACGGTCGATCATGACGCAACAGTCACGGCGCGCGGCACGAAGTTCGATGTCTTCCGACGCGATCACGCGATCGACGTCGTCCTTTACGAGGGCTCGGTCGAGGTCGTGAACCTCGCCAACGGCGAGCGGCGCGTGCTGACCCCGGGCCAGTCGATCACGATCGACAAGGATCTGCCACTGCGTGCAACCCGGATTTCACCGGACGAACGGGGCCTTTGGCGGTCCGGTCACCTATCGTTCCACGAAACACCGCTGAGGGACGCCGTCGGCCAGATCAATCGTTACACGACGCGACCTTTGCGGCTCTCCCGCGAAAGCCTCGGCGACGATCCCATCAGCGGCGAGTTTTCCGCCGACGATATTGAGGGTTTCGCGGCCGCGACGAATACACTCTATGGCCCAGGCGCCGTTGTTCGTTCCAAGACGGATGAGTGA
PROTEIN sequence
Length: 317
MSVSDQHNADDEAALWISRLQSRSVSTHDLADFARWRRNPNNAEAYARAEAFWDSSGRLSSDPDIAAAINRAQNTRRRPVWHRFAMPALALASAAAAILLFFSGGLVTTPTEHYTTIAGERSVLRLDDGTRVQLDTDSGISTAFTSRDREVSLTKGRAYFEVRHDARRPFVVTVDHDATVTARGTKFDVFRRDHAIDVVLYEGSVEVVNLANGERRVLTPGQSITIDKDLPLRATRISPDERGLWRSGHLSFHETPLRDAVGQINRYTTRPLRLSRESLGDDPISGEFSADDIEGFAAATNTLYGPGAVVRSKTDE*