ggKbase home page

SCNpilot_expt_300_bf_scaffold_1110_22

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(19751..20179)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D693FD related cluster n=1 Tax=unknown RepID=UPI0003D693FD similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 133.0
  • Bit_score: 170
  • Evalue 1.70e-39
Elongation factor GreAB {ECO:0000313|EMBL:ETI64571.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 133.0
  • Bit_score: 170
  • Evalue 2.40e-39
GreA/GreB family elongation factor similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 139.0
  • Bit_score: 162
  • Evalue 7.80e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. C100 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGACCATCGTTAACGCTGCCGCGCGCCCTCCCATTCATATGATCGACACCGAAGCCGATGCCCTGGCCGATCTCGGAATGCGTGCCCACGCCCGCCAGTCAGATGTTAGCCGCCTGTTGATGGCCGAGATCGAACGCGCCAGGATTCACCCCGCCGAGGACATTCCTCCGGACGTCGTGACCATGCGTTCGACGGTCGAGTTTGTCGATCAGGCAACCGGCACCCGTCGCACCGTCGAACTTGTCTACCCTGCCGAGGCCGATATTGCTGCGAACCGGATCTCCGTAATCACTCCTGTCGGCGCCGGGCTCATCGGCTTGCGCGAAGGTGACTCAATACTCTGGCCAGATCGCGATGGACACGAACGCACGCTGAGCGTCGTAAAGGTGATCCAACCGGCACGAGACACGACAGCAAAAAGTCGCTGA
PROTEIN sequence
Length: 143
MTIVNAAARPPIHMIDTEADALADLGMRAHARQSDVSRLLMAEIERARIHPAEDIPPDVVTMRSTVEFVDQATGTRRTVELVYPAEADIAANRISVITPVGAGLIGLREGDSILWPDRDGHERTLSVVKVIQPARDTTAKSR*