ggKbase home page

SCNpilot_expt_300_bf_scaffold_1118_3

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(2298..3785)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P2_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 499.0
  • Bit_score: 676
  • Evalue 2.60e-191
  • rbh
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 499.0
  • Bit_score: 676
  • Evalue 7.30e-192
TonB-dependent receptor {ECO:0000313|EMBL:ABD26131.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 499.0
  • Bit_score: 676
  • Evalue 3.60e-191

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1488
TTGAAGCTGGTGCTGCGCGGCTCGGTCAGCGAGCAGACGCCGCACAATTACGGCATCTATGCGCAGAACGCGGATCAGACGCGCGTCGACGGCCTCGACCGCTATCACATCGCCTCCGACATCGCGACGCGCCGTATCGCCCGCACGCAATCGGTGGCGTTGACCGCCAACTACGAACTGACCGATGCGCTGACGCTGACCAGCATCACTTCCTATGACCACGGCACCCTGTTCTTCACCGAGGACACGGACGGCCAGGCGAACAAGACGCTGGAAATCCCCTATGGCGACCGCGCCAGCCAGTTCGCGCAGGACCTGCGCCTGACCAGCAACCTGTCCGGGCCGTTCGACTTCATCTTCGGCCTCTATTTCAATCGCGAGAAGGTGTTCAACACCACCTCCTTCCAGATATTCAATGATGTCGATCTCAATGAGGACGGCCGGATCGACGCCGCCGATTGCGCCGCGGGGGTGGAGGACGGCACCTTCGTCGCCTGCAAGGTGAAGAACCGCTTCGATCAGGTGAAAAAGAGCTTCGCGGCCTATACCGACCTCAAGTTCAGGGTGAGCGACGCGATCACCTTGCGCGGCGGCCTGCGCTACACCCACGATATCGGGCGGCAGACCGGCTTCCGGTCCGACGCGTTCGGGGTGGACGATGTGCTGGTGGCGAATTTGATCCCGCTCACCTCCGCCTCGTTCAAGACGGACAATCTCTCCGGCAAGATCGGGCTGGACTACAAGCTGGCCGACGGCAACCTGCTCTATGCCAGCATCAGCCGGGGCTATCGCGCGCCGAGCTTCAACGCGCAGGCGTTCTTCCAGCCGGACGAAGTTTCCGTCGCGCGGGCGGAGAAGGTCACTTCCTATGAGATCGGCGCCAAGACCCGCATGTTCGACCGGCGCGTCACGCTGAATCTCGCCGCCTTCTACTACGATTACCGCAACCAGCAGTTCATCAACGTCGATCCGGCCACCGCAGCGCAGACATTGCTCAACATCCCCAAGTCGCGCATCTTCGGCGGCGAGGCCGAGCTGACCGCGCGCATCGTGGACGGCTTCCAGCTACATGGCGGACTGGGCCTGCTGTCGACCAAGATCATCGAGGGCACAGTCAGCGGCGCGGACGTCGCCGGGCACAAGCTGGCCAACGCGCCGTCCTTCACCTTCAACATCGGGCCGGACATCACGCTGGCGCGCGGCAGCTTCGGCACGATCAGCCTGCATCCAGCGCTGTCCTATCAGTCCAGCCAGTATTTCGAGGTGATCAACGAGCCGATCCTGCAGCAGAAGGGCTATGCGCTGCTCGACGCGCATCTCGATTATGAAAGCGCGGATGGGCACGTCACCGCATCGGCCTGGGTGAAGAATGCTGCGCAGCAATTCTACTTCACCTCACGGGTCGATCTGCTCGCCGGCTTCGGCTTCATCTACAACCATATCGGCAACCCGCGTACCTATGGCATCACGCTGGGCTACAAGATCTGA
PROTEIN sequence
Length: 496
LKLVLRGSVSEQTPHNYGIYAQNADQTRVDGLDRYHIASDIATRRIARTQSVALTANYELTDALTLTSITSYDHGTLFFTEDTDGQANKTLEIPYGDRASQFAQDLRLTSNLSGPFDFIFGLYFNREKVFNTTSFQIFNDVDLNEDGRIDAADCAAGVEDGTFVACKVKNRFDQVKKSFAAYTDLKFRVSDAITLRGGLRYTHDIGRQTGFRSDAFGVDDVLVANLIPLTSASFKTDNLSGKIGLDYKLADGNLLYASISRGYRAPSFNAQAFFQPDEVSVARAEKVTSYEIGAKTRMFDRRVTLNLAAFYYDYRNQQFINVDPATAAQTLLNIPKSRIFGGEAELTARIVDGFQLHGGLGLLSTKIIEGTVSGADVAGHKLANAPSFTFNIGPDITLARGSFGTISLHPALSYQSSQYFEVINEPILQQKGYALLDAHLDYESADGHVTASAWVKNAAQQFYFTSRVDLLAGFGFIYNHIGNPRTYGITLGYKI*