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SCNpilot_expt_300_bf_scaffold_1118_4

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(3782..4519)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IE73_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 219.0
  • Bit_score: 310
  • Evalue 1.80e-81
TonB-dependent receptor {ECO:0000313|EMBL:KHS46723.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 224.0
  • Bit_score: 326
  • Evalue 3.50e-86
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 219.0
  • Bit_score: 310
  • Evalue 5.20e-82

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGAAGGATCTTTTGTTGTTGCGGGCGAGCGGGGCGGCACTGGCCGTCGCCGTCGCCCTCGTGGCGCCGCCGGTTCTGGCGCAGGCGGCGGACACGCCGGAAGCCGATGCGCCGGGCGAAATCATCGTCACGGCGACCAAGCGTTCGGAAAGCCTCCAGTCGGTGCCGATCTCGGTCTCGGCAATCGGCGGGGACGATCTTTCCAAATCGCGCACCACCAGCGTCGACGATCTGACCAGCAAGGTCGCCAACCTCCAGATGACCGGCATCGTCGGCGACAACACGCCGATCTTCAGCCTGCGCGGCGTGTCGATGTCGGACTACAGCCTCAACCAGTCCAGCCCGGTCGCGACCTATTATGACGAGGTCTACAAGGGCAATTTCGCCTTCCTCGGCGTGGCCATGTACGATCTGGAGCGGGTGGAGGTGCTGCGCGGGCCGCAGGGCACGCTCTATGGCAAGAACACCACCGGCGGCGCGGTCAACATCATCAGCCGTGACGCCGCGCTCGGCGAGACCGGCGGCTACATCAACGCGGGCTATGGCAATTACAACCGCGTCGACGTGAACGGCGCGATCAACCTGGCGCTGGGCGACAAGGCCGCGCTGCGCGTCGCGGGCACCTACAGCCATGCCGACGGTGGTTCAGGAACGTCCTGCCCGGCATGCCCGATCTCGCCGAAACGCGCGAGTTCGCCTTCCGCGCCACGCTGCACTGGGAGCCGACCGACCGGTTGA
PROTEIN sequence
Length: 246
MKDLLLLRASGAALAVAVALVAPPVLAQAADTPEADAPGEIIVTATKRSESLQSVPISVSAIGGDDLSKSRTTSVDDLTSKVANLQMTGIVGDNTPIFSLRGVSMSDYSLNQSSPVATYYDEVYKGNFAFLGVAMYDLERVEVLRGPQGTLYGKNTTGGAVNIISRDAALGETGGYINAGYGNYNRVDVNGAINLALGDKAALRVAGTYSHADGGSGTSCPACPISPKRASSPSAPRCTGSRPTG*