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SCNpilot_expt_300_bf_scaffold_1118_12

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 8339..9025

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P9_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 212.0
  • Bit_score: 293
  • Evalue 1.70e-76
Transcriptional regulator of tetR family {ECO:0000313|EMBL:GAO57019.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 214.0
  • Bit_score: 307
  • Evalue 1.20e-80
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 212.0
  • Bit_score: 293
  • Evalue 4.70e-77

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGGCACAGACAGAGAGGATAATTACGGTGAATCAATCTGATAATATCCCCGGCCTCATTACCGACCTGATCGTGCCCGAGCGCGACGGCGGCTATTCGAAGGGCCGGGAGACGCGCGAAATGATCCTGCTCGCCGCGCTTTCGATCCTGATCGACGAGGGTTACCGCGCCATGTCGATGCGCCGAGTCGCGGCGGCCTGCGGGATGAAATTCGGCAACCTCACCTATCACTATCGCACGCGGGAGGACCTGGTGCGCGAGTTGCTCGACGCGGTGATCCGCAGCTACGAGCAGGAGTTCGACGCGATCGTCCACAGCCCCGGCCACAGCCCGGAGCAGCGGCTGGAACGCTATTGCCTGCTGGTGCTCAACGACATCACCACCAGGAAGACGACGCGGCTGTTCCCCGAGCTCTGGGCTTTGTCGAACCACGACCCCTTCGTTTACGACCGGATGCACGAGCTATACGCTCGCGCCCGGCGACCGTTGCTGGAAGTGGTGGCGGAGATGCGCCCCGATCTGACCGAAGAAGAGCGGGAGATGCTGACCCTGTTCATCTCCTATTCGATGGAAGGTTCCACGATCTTCGCCGGCCACGACAAGCCATTCACGCCGCAAATGGGCTGCCTGATGGAAGTCTCGATAGAGGCATTCAAAGCCCTGGTGCGCGATTTCAAGAGGCAGTGA
PROTEIN sequence
Length: 229
MAQTERIITVNQSDNIPGLITDLIVPERDGGYSKGRETREMILLAALSILIDEGYRAMSMRRVAAACGMKFGNLTYHYRTREDLVRELLDAVIRSYEQEFDAIVHSPGHSPEQRLERYCLLVLNDITTRKTTRLFPELWALSNHDPFVYDRMHELYARARRPLLEVVAEMRPDLTEEEREMLTLFISYSMEGSTIFAGHDKPFTPQMGCLMEVSIEAFKALVRDFKRQ*