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SCNpilot_expt_300_bf_scaffold_1118_17

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(12971..14371)

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Sphingomonas melonis RepID=UPI00037CB3B5 similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 492.0
  • Bit_score: 676
  • Evalue 1.90e-191
  • rbh
Sphingomonas taxi strain 30a NODE_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27058.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 492.0
  • Bit_score: 674
  • Evalue 1.30e-190
oprM2; Outer membrane protein OprM similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 466.0
  • Bit_score: 632
  • Evalue 8.70e-179

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGCTCGCCGGCGCGACCGCGCTGACGGCGTGCAACCTCGCCCCGAAATACGTCCGCCCGGTCGGCGCCGTCCCGGCGGAATTGCCGCAGGGCGGCCCCTATCCGTCCGCCGCAACCGACGCGCCGGACGTCACCAAGGTCGGCTGGCGCGATTTCTTCCTCGACGCGCGGCTGCGGCAGGTGATCGAGACCGGGCTGGCGAACAACCGCGACCTGCGCGTCGCCGCCGCGAACGTGCTTCAGGCGCGCGCGCAATATCGCGTGCAGCGCGCCGATCTGGTGCCCTCGACCAATGTGAGCGCCGGCGCGACCTACACCAACAGCGCGGCGAGCGCCGGCGGCGGGGCAGCGGCGGGCGGGGCGACGTCGACTAATTTGGACATCTATTCGGTCAACGCCGGCTTCTCCTCGTTCGAACTCGACCTGTTCGGCCGCACTCGCAACCTCAGCCGCGCCGCGCTGGAACGCTATTTCGCCAGTGAGGAAGCGCAGCGATCGGCGCGTATCAGCCTGATCGCGGAGATCGCGACCGCCTGGCTGACGCTGGCGTCCGACCGCGATCAGCTCGCGCTGTCCGAGCAGACGCTCAGGACGTTCGAGCAGACGCTGGAGTTGACGCGCGCGCAATTCCGCATCGGCGTCGCATCGGAACTGGAGGCGCGGCAGGCGGAGACGAACTATCAGGGCGCGCGCAACGATATCGCCGCGCTGCGCACGCGGATCGCGCAGGACCAGAATGCGCTGAACCTGCTGGCCGGCGCGCCTGTGGCCGCCGATCTGCTGCCGTCCGCGCTGGGCGAGGGGCAGGTGACGCTGGATGCCCTGCCGGGCGACCTTTCCTCGCGGGTGCTGCTGCGCCGCCCGGACGTGTTGCAGGCGGAGCATCAGCTCATCGCGGAGAACGCCAATATCGGCGCGGCGCGCGCGGCCTTCTTCCCGACGATCTCGCTCACCGCGACGCTCGGGACGATCTCCACCGCGCTCGGCGGCCTGTTCTCCAGCGGCAGCTTCACCTACACCGCCACGCCGACCGCGGCGCTGCCGCTGTTCGACGGCGGGCGCAACGCTGGCAACCTGGCTTACGCCAAGGCGTCGCGGGACGCGGCGGTGGCGACCTATGAAAAGTCGATCCAGTCGGCGTTCCGCGAGGTGGCCGACGCGCTGGCGCTGCGCGGCACGATCGGCGAGCAGATCGCCGCGCAGGGCGCGCGGGTAGAGGCGGCGCGGGTGGCGGCGCGCCTGTCCGACGCGCGCTATCGCGCCGGGGTCGATTCCTTCCTCACCGCGCTCGACGCGGAGCGCACCGCTTATGCGGCGCAGCAGCAGCTCCAGACGACGCGGCTCGCCCGTTTGAGCAACCTGGTCGAGTTGTATCGCGCGCTTGGCGGCGGGCTGGATTGA
PROTEIN sequence
Length: 467
MLAGATALTACNLAPKYVRPVGAVPAELPQGGPYPSAATDAPDVTKVGWRDFFLDARLRQVIETGLANNRDLRVAAANVLQARAQYRVQRADLVPSTNVSAGATYTNSAASAGGGAAAGGATSTNLDIYSVNAGFSSFELDLFGRTRNLSRAALERYFASEEAQRSARISLIAEIATAWLTLASDRDQLALSEQTLRTFEQTLELTRAQFRIGVASELEARQAETNYQGARNDIAALRTRIAQDQNALNLLAGAPVAADLLPSALGEGQVTLDALPGDLSSRVLLRRPDVLQAEHQLIAENANIGAARAAFFPTISLTATLGTISTALGGLFSSGSFTYTATPTAALPLFDGGRNAGNLAYAKASRDAAVATYEKSIQSAFREVADALALRGTIGEQIAAQGARVEAARVAARLSDARYRAGVDSFLTALDAERTAYAAQQQLQTTRLARLSNLVELYRALGGGLD*