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SCNpilot_expt_300_bf_scaffold_1323_5

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(5800..6474)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 246.0
  • Bit_score: 335
  • Evalue 5.20e-89
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Sphingomonas sp. S17 RepID=F3WZC0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 246.0
  • Bit_score: 335
  • Evalue 3.70e-89
16S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 247.0
  • Bit_score: 316
  • Evalue 6.60e-84

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGATCGCCACCCCCGCCTGGCCGCCGCGCTCGACGCCGCGTTTGTATGTGCCCGAGCCACTCGCTGCCGGCATGCGGCGGATCGACGGGCCGGCGGCGCATTATCTAGGGCAGGTGATGCGGCTGAAGGCCGGCGATCCGGTCAAACTGTTCGACGATGCGACCGGCGAATGGCTGGCGGTGGTGGAGAGCGCCGGGCGGCGCGAACTGACGCTCGACGTGCGCGAGCGGCTGGCGGAACGCGAGGCGGTGCCGGACCTGTGGCTGCTCGCCGCGCCGCTCAAGAAGGGGCGGGTCGACTGGATGGCGGAAAAGGCGTGCGAGCTTGGCGTCGCGCGCTTCGTTCCGGTCGTCACGCGGCGAACGGTGGTCGACAGGCCCAACNNNGTGGACGAGCCGGTGAAGCTCCCCGTGCTGTTGCGCGATTGGCCGGCGGGGCGCGCGCTTTATTTCGCCGACGAGCAGGGCGGGGCGCCTGCGTCCGAGGCGATGCGACCGGGCGCGGCGGCGATCCTGATCGGCCCGGAAGGCGGATTCGACGACGAGGAGCGCGCGTTGATCCGCGCGACGCCCGGCGCGGTGGCGATCTCGCTCGGGCCGCGTATCCTCCGCGCCGATACCGCCGCCGCCGCCGCCGTCTCCATATGGATGGCGAGCGCGGGGGACTGGCGGTAA
PROTEIN sequence
Length: 225
MIATPAWPPRSTPRLYVPEPLAAGMRRIDGPAAHYLGQVMRLKAGDPVKLFDDATGEWLAVVESAGRRELTLDVRERLAEREAVPDLWLLAAPLKKGRVDWMAEKACELGVARFVPVVTRRTVVDRPNXVDEPVKLPVLLRDWPAGRALYFADEQGGAPASEAMRPGAAAILIGPEGGFDDEERALIRATPGAVAISLGPRILRADTAAAAAVSIWMASAGDWR*