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SCNpilot_expt_300_bf_scaffold_1554_3

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 3611..3970

Top 3 Functional Annotations

Value Algorithm Source
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07H02_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 84.0
  • Bit_score: 109
  • Evalue 1.80e-21
sensor/response regulator hybrid similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 96.0
  • Bit_score: 129
  • Evalue 4.70e-28
Sensor/response regulator hybrid {ECO:0000313|EMBL:AJA09194.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphin similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 96.0
  • Bit_score: 129
  • Evalue 2.30e-27

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
GTGCTGGAAGTCGTGACGGAACCTGCCGCATACGGCGCCCTGCTCGAAACCGGCGGCGAGATGGGGCGCCGCATCGTCGACCATGACTGGAGCGACACGCCGCTCGGCCCGATCCGCTGCTGGTCGCAGAGCCTGCGCGCGATCGTCGCCTTCATCGTCCATTCGCCGGTGCCGATGGTGATGCTGTGGGGCGAGGACGGCATCATGCTCTACAACGACGGCTATTCGGTGTTCGCCGGCGCCAATCATCCCCGCATCCTGGGCCGGCACGCTCGCCTACAGGGACCACCTGCTCAGCCTGAACCGCACCGGCAGGTTCGAGGACGTGTGGATGAACCTCGATTATTCGCCGGTCTATGA
PROTEIN sequence
Length: 120
VLEVVTEPAAYGALLETGGEMGRRIVDHDWSDTPLGPIRCWSQSLRAIVAFIVHSPVPMVMLWGEDGIMLYNDGYSVFAGANHPRILGRHARLQGPPAQPEPHRQVRGRVDEPRLFAGL*