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SCNpilot_expt_300_bf_scaffold_1554_7

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 6684..7310

Top 3 Functional Annotations

Value Algorithm Source
uracil-DNA glycosylase id=12554740 bin=CNBR_ACIDO species=Sphingobium japonicum genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 188.0
  • Bit_score: 299
  • Evalue 2.10e-78
Uncharacterized protein {ECO:0000313|EMBL:CCW17057.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 191.0
  • Bit_score: 279
  • Evalue 3.20e-72
uracil-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 190.0
  • Bit_score: 263
  • Evalue 4.70e-68

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGCCGATTGCCCCCGATGAGAAACCGCTGGCCGATCTGCTTGACGAGATAGGCCGCTGCCGCCTGTGCGCGCCCCACCTGCCGCATGAGCCGCGCCCGGTGGTGCAGGCTGGCCGGAACGCGCGGCTGCGCATTGTCGGGCAAGCCCCCGGCCGCAAGGTGCATCAGAGCGGCATCCCGTGGGACGACGCCTCCGGCAACCGGCTGCGCGCGTGGATCGGCCTCACGCCGGCCGAGTTCTACGATGCGGAAAAGGTCGCGATCATTCCGATGGGCCTCTGCTATCCCGGCAAGGCCGCGTCGGGCGACAATCCACCCCGGCCGGAATGCGCGCCGCGCTGGCACGCCCGGCTCGCCGCGCTGCTGCCGGATATCGGGCTGACGCTGCTGATCGGCCAATATGCGCTGGCAAGCTATCTCGGCGCGGCGCGCAAGGCGACGCTCGGCGATACCGTCCGGGCGTGGCGCGAATATCTGCCGCGGGGCGTGCTGCCCCTTCCCCACCCCTCGCCGCGCAACCAGCCGTGGCTCGCACGCAATCCGTGGTTCGAGGGGGAGATGCTGCCGGACCTGCAAGCCGCCGTCCGCGCGGCGCTGACCGATCGGTCCATCCACCCCCTTTCCTGA
PROTEIN sequence
Length: 209
MPIAPDEKPLADLLDEIGRCRLCAPHLPHEPRPVVQAGRNARLRIVGQAPGRKVHQSGIPWDDASGNRLRAWIGLTPAEFYDAEKVAIIPMGLCYPGKAASGDNPPRPECAPRWHARLAALLPDIGLTLLIGQYALASYLGAARKATLGDTVRAWREYLPRGVLPLPHPSPRNQPWLARNPWFEGEMLPDLQAAVRAALTDRSIHPLS*