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SCNpilot_expt_300_bf_scaffold_5283_12

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 6876..7262

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPW6_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 131.0
  • Bit_score: 133
  • Evalue 2.10e-28
TonB-dependent receptor {ECO:0000313|EMBL:EZP68916.1}; Flags: Precursor;; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 133.0
  • Bit_score: 140
  • Evalue 1.90e-30
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 131.0
  • Bit_score: 133
  • Evalue 6.00e-29

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGACGGGCGGACGGATGAGTGGTTTCGCGATGCTGATGGCGGGCGCGGGTTTGGTCGGGGCCGGGGCTCCAGCATCAGCTCAGGAGCGGGAAACCTATCAGTTCGATCTTCCGGCGCAGGATCTTGGCGACGCGTTGCGGGCGGTAGCAGCCAAGGCTGGACTGGAGCTTTACGCGTCTGCTGGCGACCTGAACGGGGTCGCGGCGCCGACGCTGCACGGCACCTTCACGGCGCGCGAGGCCGTCGAGCGGCTGGTGCGCGGGACCAAATTGTCGGTCCGCTTTGACAAGGGCGCGGTGATTGTCCGGGGGCGATCGGAGGTAGCCGATGCAAATGGCTCGTCCGAGAAGGACATCATCGTCACAGGCACGCAAATTCGCGGTACG
PROTEIN sequence
Length: 129
MTGGRMSGFAMLMAGAGLVGAGAPASAQERETYQFDLPAQDLGDALRAVAAKAGLELYASAGDLNGVAAPTLHGTFTAREAVERLVRGTKLSVRFDKGAVIVRGRSEVADANGSSEKDIIVTGTQIRGT