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SCNpilot_expt_300_bf_scaffold_5283

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_5283_1
unknown

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comp(1..174)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_5283_2
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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233..685
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HGZ7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11388.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
SCNpilot_expt_300_bf_scaffold_5283_3
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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715..1050
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HEG1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11387.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
SCNpilot_expt_300_bf_scaffold_5283_4
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1070..1606
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028976AD
Uncharacterized protein {ECO:0000313|EMBL:KHA65716.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_expt_300_bf_scaffold_5283_5
unknown

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comp(1496..1753)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_5283_6
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1830..2387
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0II44_9SPHN
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EZP82430.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
LuxR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_5283_7
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2493..3119
DNA (627bp) protein (209aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=1331060 species="B
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IP30_9SPHN rbh
autoinducer synthesis protein
SCNpilot_expt_300_bf_scaffold_5283_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3116..3853
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HGZ4_9SPHN
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EZP68924.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
phytanoyl-CoA dioxygenase
SCNpilot_expt_300_bf_scaffold_5283_9
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3945..4550
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HEF7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11382.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
GntR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_5283_10
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5185..5703
DNA (519bp) protein (173aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPW8_SPHAL
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABF54304.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;"
SCNpilot_expt_300_bf_scaffold_5283_11
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5700..6641
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0II41_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11380.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
putative FecR protein
SCNpilot_expt_300_bf_scaffold_5283_12
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6876..7262
DNA (387bp) protein (129aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPW6_SPHAL
TonB-dependent receptor {ECO:0000313|EMBL:EZP68916.1}; Flags: Precursor;; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sourc
TonB-dependent receptor
Displaying 12 items

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