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SCNpilot_expt_300_bf_scaffold_1128_6

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: comp(4270..4929)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator n=2 Tax=Oligotropha carboxidovorans RepID=B6JDT1_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 217.0
  • Bit_score: 280
  • Evalue 1.80e-72
Transcriptional regulator {ECO:0000313|EMBL:KFL26822.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.; similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 216.0
  • Bit_score: 298
  • Evalue 9.10e-78
qseB; transcriptional regulator QseB similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 217.0
  • Bit_score: 280
  • Evalue 5.10e-73

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Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCGGCTGCTGCTGGTGGTGGACGATGACATGCTCGGCCAGGCGGTCCGCGATCATCTGGTCGCCAATGGCCATGCGACCGACTGGGTCCGTCGGCTCGACGCAGCCGAGGCCGCCCGCTTCGCCATGCCCTACGATGTGCTCCTGCTCGATCTGAACCTGCCCGACGGGCGCGGGCTCGAGTTCCTGCGGGCGCTGCGACGCCAGGGCGACACCACGCCGGTGATCATCACCACGGCGATGGACCAGCTGAGCATGCGCATCGATGGGCTGAACGCCGGAGCCGATGACTACCTGGTCAAGCCGTTCGATCTGGGCGAACTGCTGGCCCGGCTCGGCGCCGTCGGCCGCCGCTATGCCGGCAACCCCAATCCCTTGCTGGTGATCGGCCCTCTCGAGGTCGATGCGCCGCGCCGTGTCGCGACGGTATCGGGTCGGCCGGTCGAGCTCTCGGCCCGCGAATGGGCCGTACTGGAACGCCTGGCGCAGCACCCGGGAACGCTGGTCTCCAAGGCGCAGCTCGAAGATGCGCTGTTCGGCTTTGGCGACGAGGTCGAAAGCAACGCCGTCGAGGTCTATGTCAGCCGGCTGCGCCGGAAGCTGGAAGCCGGCGTGATCCACACGGTGCGCGGCCTCGGCTACCGGCTGGCGCCGCCGTGA
PROTEIN sequence
Length: 220
MRLLLVVDDDMLGQAVRDHLVANGHATDWVRRLDAAEAARFAMPYDVLLLDLNLPDGRGLEFLRALRRQGDTTPVIITTAMDQLSMRIDGLNAGADDYLVKPFDLGELLARLGAVGRRYAGNPNPLLVIGPLEVDAPRRVATVSGRPVELSAREWAVLERLAQHPGTLVSKAQLEDALFGFGDEVESNAVEVYVSRLRRKLEAGVIHTVRGLGYRLAPP*