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SCNpilot_expt_300_bf_scaffold_1131_14

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: 11255..12547

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FT37_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 426.0
  • Bit_score: 605
  • Evalue 4.90e-170
  • rbh
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:ESX82857.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 426.0
  • Bit_score: 605
  • Evalue 6.80e-170
RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 426.0
  • Bit_score: 581
  • Evalue 2.10e-163

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGACCGCACACGATACGCATCGCGCGATCGAGGCCACCTTCCGCATCGAACGGGCGAGGCTGGTCGCGGGCCTGGTCCGGCTGGTGCGGAGCATCGACCGGGCCGAGGAGCTGGCGCAGGATGCGCTGGTGATCGCGCTCGACACCTGGCCGAGGTCCGGTGTCCCCGGCAATCCCGGCGCCTGGCTGATGACAGCGGCGAGGCGCCGCGCCATCGATGCCATCCGGCACGACCGGATGCGGCAGCGCAAGCAGGCCGAGATCGCGCACAGCCTGGACCAGGCGGCCGGCGACGCCGCCGAAGCGATCGAGGCGGGCCTCGGCGATGACCCGGCCGACAACCTGGGCGATGAGCTGCTCGGACTGATCTTTGCCGCCTGTCACCCCATGCTTTCCGCCGATGCGCGCGCGGCGCTGACGCTGCGCGTGGTGGGCGGACTGAGCATCGATGAAATCGCCCGGGCCTTCCTCGCCAATGAGGCCGCCATCGCCAAGCGGATCGTCCGCGCCAAGCAGGCGATCGCCAGGGCCGGGTTGCGCTTCGAAGTGCCGCGCGGCAGCGAGCGGGTCGCCCGCCTGCCCTCGGTGCTCGAGGTCATCTACCTGATCTTCAACGAGGGCTATGCCGCGACCGCCGGCGAGGACCCGATCCGCCCGGGCCTCTGCCTCGAGGCGCAGCGGCTGGGCCGCATCCTTGCCGGACTGCTGCCCGACGACCCCGAGGTTCTCGGCCTGCTGGCCCTGATGGAGTTTCAGGCCTCGCGCCTCGCCGCCCGCCGCGGGGCCGATGGCGCCTTGGTGCCGCTCACAGAGCAGGACCGGACACACTGGGACCAGTTGCTGATCCGGCGTGGCCTCGAGGCGATGGCGCGCATCGAGCTGCTGGGCCCCGGCCCGGGCGGCTGGGGACCCTATGTGCTGCAGGCGGCTCTGGCTGCCTGCCACGCCCGGGCTCGCTCCGCCGCCGAAACCGACTGGCCCCGCATTGCCGGGCTCTACGATGGGCTCCGCCTCGTCATGCCCTCGCCCGTCGTGGCGCTCAATCGCGCCATCGCCCACAGCATGGCCTACGGGCCCGAGACCGGCCTGCAACTGCTCGACCAGCTCGCCGGTGAACCGGTGCTCCGCGACTACGCACCGCTGCCGGCGGCGCGCGGCGACGTCCTGTTCCGCGCCGGCCGCCTCGCCGAGGCACGCACCGAGTTCGAAGCTGCAGCGAGGCTCACGCGCAACGCCGAGGAGGCGGCCTTCCTCCGTGGCCGGGCCCGCGCCTGCGCCGTTTCGGCCCCGTGA
PROTEIN sequence
Length: 431
MTAHDTHRAIEATFRIERARLVAGLVRLVRSIDRAEELAQDALVIALDTWPRSGVPGNPGAWLMTAARRRAIDAIRHDRMRQRKQAEIAHSLDQAAGDAAEAIEAGLGDDPADNLGDELLGLIFAACHPMLSADARAALTLRVVGGLSIDEIARAFLANEAAIAKRIVRAKQAIARAGLRFEVPRGSERVARLPSVLEVIYLIFNEGYAATAGEDPIRPGLCLEAQRLGRILAGLLPDDPEVLGLLALMEFQASRLAARRGADGALVPLTEQDRTHWDQLLIRRGLEAMARIELLGPGPGGWGPYVLQAALAACHARARSAAETDWPRIAGLYDGLRLVMPSPVVALNRAIAHSMAYGPETGLQLLDQLAGEPVLRDYAPLPAARGDVLFRAGRLAEARTEFEAAARLTRNAEEAAFLRGRARACAVSAP*