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SCNpilot_expt_300_bf_scaffold_2165_1

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: comp(1..1239)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8L4_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 414.0
  • Bit_score: 533
  • Evalue 1.70e-148
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DS similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 416.0
  • Bit_score: 600
  • Evalue 1.60e-168
RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 414.0
  • Bit_score: 533
  • Evalue 4.90e-149

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGGCCCTGTCGCCACGGCTTGAGGTTCGTCAGAGCCAGGGCCTGACGCTCACGCCGCAACTGATGCAGTCGATCCGGCTGCTGCAGCTCAGCCACCTCGAGCTCAACAGCTTCGTCGAGGCGGAGCTGCTGCGCAACCCGCTGCTCGAGCGCGAGGACGGCGCCGAGCCGGCCGACGAGCCCACCGAGGCGCCCGAACGTCCAGCCGAGCTCAACGCCGCCGAGGATACGGTCGACTATTCCGAACGCATCCAGTCGGCCGACTCGATTGCCAATGGCTACGACACCGAGGTCGAGAACGTCTTTCCGGACCAATCCGCACCGGAGCGGCAGACCGACTCGACGCAGTGGAACGAGCGCAGTGGCGGTGGCGACGGCGAGGCGGCCGATATCGACCAGTTCGTTGCGGCCCGTCCGACGCTGGCCGATCACCTCGCGGCGCAGGCCGGCCTGATCATCAACGACCCCGGCGAGCGGCTGATCGCACAGTTCCTGATCGACAGCGTGAACGAGGCAGGCTACCTGGCGGTTGAGCTCGAAACCGTGGCAGAGCAGCTCGGCGCCCCCGTCGGGACGATCGAGGCGGTGCTCGGGAAACTGCAGGGGTGCGATCCGGTCGGCGTGTTCGCCCGCGATGTGCGCGAGTGCCTGGCGCTGCAACTGCGCGAGAACGATCGGCTCGACCCGCTGATGCTGCGCCTGCTCGACAACCTCGAGCTGATCGCCCAGCACGACCTCAATGCCCTGGCGCGGGTCGTGGGAGCCGATCGCGAGGATCTGCTCGACATGCTGGCCGAGCTGCGCCAGCTCGACCCCAGGCCCGGCCGTGCCTTCGAGGCGGGCCCGGTGGAATCGGTGGTGCCAGACGTGTTCGTGCGGCCCGGCCCGGGCGGCGAGTGGCAGATCGAGCTCAATGCCGATGTGCTGCCGCGCGTGCTGGTCAACCGCACCTATTATGCCTCGGTGACCAAGAAGACCCGCGACACGGCGGAGAAGAGTTTTCTCACCGATTGCCTCGCCACGGCCAACTGGCTGGCCAAGAGCCTCGACCAGCGCGCCCAGACCATTCTGAAGGTCACCGCCGAGATCGTGAAGCAGCAGGACGGGTTCCTCGTACACGGCATCACCCACCTCAAGCCGATGACCCTCAAGGCGGTCGCCGACGCCATCGAGATGCACGAGTCGACAGTGAGCCGCGTCACCTCGAACAAGTACGTGTCGACGCCGCGCGGACTGTTC
PROTEIN sequence
Length: 413
MALSPRLEVRQSQGLTLTPQLMQSIRLLQLSHLELNSFVEAELLRNPLLEREDGAEPADEPTEAPERPAELNAAEDTVDYSERIQSADSIANGYDTEVENVFPDQSAPERQTDSTQWNERSGGGDGEAADIDQFVAARPTLADHLAAQAGLIINDPGERLIAQFLIDSVNEAGYLAVELETVAEQLGAPVGTIEAVLGKLQGCDPVGVFARDVRECLALQLRENDRLDPLMLRLLDNLELIAQHDLNALARVVGADREDLLDMLAELRQLDPRPGRAFEAGPVESVVPDVFVRPGPGGEWQIELNADVLPRVLVNRTYYASVTKKTRDTAEKSFLTDCLATANWLAKSLDQRAQTILKVTAEIVKQQDGFLVHGITHLKPMTLKAVADAIEMHESTVSRVTSNKYVSTPRGLF