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SCNpilot_expt_300_bf_scaffold_2165_7

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: 5132..5803

Top 3 Functional Annotations

Value Algorithm Source
capD; UDP-N-acetylglucosamine 4,6-dehydratase (EC:4.2.1.-) similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 225.0
  • Bit_score: 276
  • Evalue 7.60e-72
Capsular polysaccharide biosynthesis protein capD n=1 Tax=Brucella sp. BO2 PF9_9RHIZ">RepID=E2PPF9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 225.0
  • Bit_score: 277
  • Evalue 1.20e-71
Capsular biosynthesis protein {ECO:0000313|EMBL:KKC34566.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophil similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 226.0
  • Bit_score: 292
  • Evalue 3.90e-76

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Taxonomy

Devosia psychrophila → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
GTGCTGGTGGAGGCGGCAGTCGCCGCCGGCGTTACCCGCTTCGTGCTGATCTCCTCCGACAAGGCGGTGCGCCCCTCCAGCGTCATGGGCGCCACCAAGCGCTGGGCCGAGCTGATCGTCCGCCATTACGGCAAGGGCAGCGGCCTGCGCTATTGCTCGGTGCGCTTCGGCAACGTGCTCGGCTCCAATGGCTCGGTGGTACCGCTGTTTCGCGAGCAGATTGCCGCCGGCGGTCCGGTGACCCTCACCGACAGCCGCATGACGCGCTATTTCATGTCGATCCACGAAGCCGCCGAACTGATCGTCCAGGCCGGCGCCATGGCCGAGGGCGGCGATATCTTCCTGCTCGAAATGGGGCAGCCGGTCCGCATCCGCGATCTCGCCGAGAACATGATCCGCCTGGCCGGACTGTCGGTGAAGTCGGCCGAGAACCCCTCCGGGGATATCGCCATCCTCGAAACCGGCGCCCGTCCCGGCGAGAAGCTGACCGAAGAGCTGTTCTTCGACCCGGCCAACGCCGTCCGCACCGACCAGCCGAAGATCCTCCGCGCGCCGCGCAGCGGGCGGCAGGCCCCGGACCTCACGGCCGCGCTCGCCGCTCTTACCGCGGCGCTCGAAGCCGAAGACGTGCCGGAGCTGCGCCGGGTGCTGTTCGATTTCGTCAAGGGCTGA
PROTEIN sequence
Length: 224
VLVEAAVAAGVTRFVLISSDKAVRPSSVMGATKRWAELIVRHYGKGSGLRYCSVRFGNVLGSNGSVVPLFREQIAAGGPVTLTDSRMTRYFMSIHEAAELIVQAGAMAEGGDIFLLEMGQPVRIRDLAENMIRLAGLSVKSAENPSGDIAILETGARPGEKLTEELFFDPANAVRTDQPKILRAPRSGRQAPDLTAALAALTAALEAEDVPELRRVLFDFVKG*