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SCNpilot_expt_300_bf_scaffold_1620_9

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: comp(8173..8577)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA/GreB n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A8T6_RHIFH similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 133.0
  • Bit_score: 143
  • Evalue 1.60e-31
Regulator of nucleoside diphosphate kinase {ECO:0000313|EMBL:CDP51013.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devos similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 131.0
  • Bit_score: 171
  • Evalue 1.00e-39
rnk1; transcription elongation factor GreA/GreB similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 133.0
  • Bit_score: 143
  • Evalue 4.60e-32

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGCAATCCATGCGTCGCTATGACCTCAACCCGCGTATCGTCCTCGGCGAGGACGACCATCGCAAACTCATCGCCCTGGCGCTGGCCGGCAGCGGACACAGTTCCGAGGCGGCCGACGACCTGCTCAATGAAATCGAACGCGCCCGCGTCGTGCCGACGCCCAAGCTCGGCTCGAGCATCGTGCGGATGGGCTCGACCGTGACCTACCGGCCCGACCAGGGCGCCGAACGTACTGTACAGCTGGTCTACCCGGTCGATGCCGACATCGCGCAGGGCAGGATCTCGGTGCTGACGCCGGTCGGCACGGCGCTGATCGGACTCAATGTCGGCCAGTCGATCACCTGGGAGGCGCGCGACGGCAGCAAGCACGTGCTGACTGTGATGGCGGTCGAGCCGCAGGCGTGA
PROTEIN sequence
Length: 135
MQSMRRYDLNPRIVLGEDDHRKLIALALAGSGHSSEAADDLLNEIERARVVPTPKLGSSIVRMGSTVTYRPDQGAERTVQLVYPVDADIAQGRISVLTPVGTALIGLNVGQSITWEARDGSKHVLTVMAVEPQA*