ggKbase home page

SCNpilot_expt_300_bf_scaffold_1620_14

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: 11017..11772

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLA2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 232.0
  • Bit_score: 207
  • Evalue 2.20e-50
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDP51011.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 251.0
  • Bit_score: 324
  • Evalue 1.40e-85
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 234.0
  • Bit_score: 199
  • Evalue 1.30e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGAAGACCGAGGCAAGTCCCTACCAATTTCTCAGCGCTCCGGCGACCCCGACCCGCGGCAACGTCACGGTGTTCGTCACCGATACCCTGCGCCAGGCCATCGTCGCGCTCGATCTGAAGCCCGGCGAAGTGATCGACAAGGGGGCCATCTGCGAGCGCCTCGGCGTCTCCCGCTTCCCGGTCTCCGAAGCGCTGGCCCGGCTGCAGGCCGAAGGCCTCGTCGATATCCTGCCGCAGCGCGGCTCCACCGTGTCGCTGGTCCGCATCGCCGACGTGCTCGAGTACATGCTGATCCGCAAGGCGCTCGAAGCCGAGGCGGTGCGCGTCGTCACCGGCAACCACAGCCCCGAACTGATCGACACATTGCAGCGCAACATGAGCTACCAGCGCGCCGCCGTGGAGATCGACGATCAGAACGGCTTCCACGAGCGCGATCTCGAATTTCACGACATCATCTTCGGCGACATGCGCTTCACCAAGGTGAAGGGCGTCATCGAGAATACCCGCGCCAATCTCGACCGGGCCCGTCGGCTGATCCTCACGCCGCGCCGGTTGAGCGTCACCCTCGCCGAACACCAGAAGATCCTCGACGGCATCACCGTCGGCGACGCCGCCATCGCCTCGGCCGCCATGCGCGCTCATATCGACTCCGTGATGGCCGAACTGATTGCCTTCGCCGTCGACCACGCCGAGCTTTTCGCCGATGGCCAGTTGCTGCGCGAAGATCCGGCCTATTCCGCCTTTCCGTTCGGCTGA
PROTEIN sequence
Length: 252
MKTEASPYQFLSAPATPTRGNVTVFVTDTLRQAIVALDLKPGEVIDKGAICERLGVSRFPVSEALARLQAEGLVDILPQRGSTVSLVRIADVLEYMLIRKALEAEAVRVVTGNHSPELIDTLQRNMSYQRAAVEIDDQNGFHERDLEFHDIIFGDMRFTKVKGVIENTRANLDRARRLILTPRRLSVTLAEHQKILDGITVGDAAIASAAMRAHIDSVMAELIAFAVDHAELFADGQLLREDPAYSAFPFG*