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SCNpilot_expt_300_bf_scaffold_2378_9

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: 6114..6506

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CEU4_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 125.0
  • Bit_score: 134
  • Evalue 9.60e-29
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 125.0
  • Bit_score: 134
  • Evalue 2.70e-29
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AAK90193.1}; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 125.0
  • Bit_score: 134
  • Evalue 1.30e-28

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Taxonomy

Agrobacterium fabrum → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGGCGGTTCGCGCGGCGAGCCGCAGCCTGACGGCACGCTATGATGCCGTGCTCGAGCCCGTCGGGATCAGCCTGGCGCAGTTCTCGCTGCTCCGGACTCTTTCGCAACACTCGCCGGTGTCGCTGACGAAGCTGGCCGAACGCGTCGAGCTCGATCGCTCGACGCTGGGGCGCAACGTGCGGGTGCTGCAGCGCGCCGGCCTGGTGGCGATCCGGCCGGGCGATGACCTGCGCGAGGCGCGGCTCAGCCTGACCGCAGCCGGAGAAGCGACGCTGCGCCGGGCGGTGCCGATCTGGCAAGGCGCCCAGGATGAGCTCCTCCGGCGGCTCGGTACCGATGGGGCGGCGCAACTCGAGGCCCTGCTCGGGGTGCTCCAGGCATCCGAAGGGTGA
PROTEIN sequence
Length: 131
MAVRAASRSLTARYDAVLEPVGISLAQFSLLRTLSQHSPVSLTKLAERVELDRSTLGRNVRVLQRAGLVAIRPGDDLREARLSLTAAGEATLRRAVPIWQGAQDELLRRLGTDGAAQLEALLGVLQASEG*