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SCNpilot_expt_300_bf_scaffold_8534_1

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: 373..1134

Top 3 Functional Annotations

Value Algorithm Source
GntR domain protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UG69_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 216.0
  • Bit_score: 154
  • Evalue 1.30e-34
Transcriptional regulator NanR {ECO:0000313|EMBL:CDP50779.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB00 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 233.0
  • Bit_score: 272
  • Evalue 4.70e-70
transcriptional regulator NanR similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 216.0
  • Bit_score: 154
  • Evalue 3.80e-35

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGGCGACCGAAGCTGCGGAGATCGCGCAGGCGCTGGCCGAGCAGATTCATTCCGGTGCGATCCGCTCCGGCGAGATGATCCCGTCTGAGCGCGACCTGTGTGAGCGCTTCGCTGTCGGGCGTACCGTGGTGCGCGAGGCCATCACCATGCTCGAGGGCATGAAGCTGATCGAGCAGCGCAAAGGCTTCCGTCCCCGTGTGGTCACTCCGACGCTGGCCCAGGCCATGGCCGGCGCGGCCGAGGCGGCCCGGTTCTTCTTTCGCGGCAGCGAGGGCAATGCGCATCTGGAGCAGGCCCGCTTCTTTCTCGAAATGAGCCTCGTGCGCTATGCCGCGCAGTTCGCCACGCAGGCGCAGCTGGGCAAGATGCTGGCCGCCATCGAGGCCTGCGAGCGCGCCATCGGCAGCTACCCGCAGTTCCGCGAGGCGGACCTGCGTTTCCATCGCACCATTGCCGAGGTGCCGGGCAACCCGATTTTCGTCGCCCTGCACGATGCGTTCGTCGATCGCCTGATGCGCCGCCGCGAGGCGCCGGTCGATGTCGCCACCCATAATCGGCGCAGCAATGACGAGCACCGCGCCATCGTCACCGCGCTTGTCGCCCGCGACGAGCAGGAGGCGGTCAGGGTGCTGACCGTCCACCTGTCGCGCAACTACGCCACCTACATGCGCCAGGCCCTTACCGGCACTGAAGCCCTTATCGGCACCGAAGCGCTTGTCGGCACTGAACCACGTGCGGCCGTTTCCAACTCGGAGGGATGA
PROTEIN sequence
Length: 254
MATEAAEIAQALAEQIHSGAIRSGEMIPSERDLCERFAVGRTVVREAITMLEGMKLIEQRKGFRPRVVTPTLAQAMAGAAEAARFFFRGSEGNAHLEQARFFLEMSLVRYAAQFATQAQLGKMLAAIEACERAIGSYPQFREADLRFHRTIAEVPGNPIFVALHDAFVDRLMRRREAPVDVATHNRRSNDEHRAIVTALVARDEQEAVRVLTVHLSRNYATYMRQALTGTEALIGTEALVGTEPRAAVSNSEG*