ggKbase home page

SCNpilot_expt_300_bf_scaffold_6514_9

Organism: SCNPILOT_EXPT_300_BF_Rhodospirillales_66_5_fragment

partial RP 25 / 55 BSCG 21 / 51 ASCG 2 / 38
Location: 6177..7514

Top 3 Functional Annotations

Value Algorithm Source
Signal recognition particle protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z325_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 433.0
  • Bit_score: 541
  • Evalue 6.80e-151
ffh; GTPase of the signal recognition particle; K03106 signal recognition particle subunit SRP54 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 438.0
  • Bit_score: 765
  • Evalue 5.30e-218
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 421.0
  • Bit_score: 542
  • Evalue 1.50e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
ATGTGTTCGACCGGCTGCGGGCGCACCGCTCTGCTCGAAGCCGACGTGGCGCTGCCTGTCGTCCGCCAGTTCATCGATGAAGTCCGTCCCAAGGCGATTGGCGCCGACGTGATCCGTTCGGTCACGCCGGGCCAGATGGTGGTCAAGATCGTCAACGATCACCTGATCGAAATGTTGGGCGGTACTGTGTCCGATCTCGACCTCGGCGCCGTGCCGCCGGTCGTGATCCTGATGGTCGGCCTGCAGGGTTCGGGCAAGACCACCTCCTCCGCCAAGATCGCCTACCGCCTGAGCCAGGGCCCGCAGGGCATGGCTGCCGAGATGTTCGGCGGCACCTTCGCGACCAGGCGCCGGGTGATGATGGCCTCGCTCGACACCCGCCGCCCGGCTGCCCAGCATCAGCTCAAGGTGCTGGGCGAGCAGACCGGCGTGCCGACCCTGCCGATCGTGCCGCTCGAGATGCCGCTCGCCATCACGCGGCGGGCGCTCGAGACCGCCAAGCGCGAGGGCTTCGACGTCCTGATCCTCGATACGGCGGGCCGCCTCGCCATCGACGAGGAGCTGATGACGGAGGTCAAACAGATCTCCGATCTCGCCACCCCGAAGGAGACATTGCTCGTCGCCGACGCCATGACCGGCCAGGACGCCGTCAACGTGGCCAAGGCCTTCAACGAGCGGCTGGCCGTGACCGGCATCGTGCTGACCCGCGTCGACGGCGATGCGCGCGGCGGTGCGGCGCTCTCCATGCGCGCCGTCACCGGCCGTCCGGTCAAGCTGATCGGCGTCGGCGAAAAGTTCGATGCGCTGGAGCCGTTCCATCCCGACCGCATCGCCAGTCGCATCCTCGGCATGGGCGACATCGTCTCGCTGGTCGAGCGCGCTGCCGAGACGATCGAGAAGGAAGACGCCGAGAAGCTCGCCGCCAAGGTGCGCAAGGGTCAGTTCGACATGGACGACCTGCTGAGCCAGCTCCGGCAGCTGCGCAAGATGGGCGGCCTGTCGGGCCTGATGGGCATGTTGCCGGGCGCGCTGCAGGCCAAGGCCGCGATGTCCAAGGCCAAGATCGACGAGGGCCAGCTCAAGCGCCAGGAGGCGATCATCCTGTCGATGACGCCCAAGGAACGACGCAACCCCGACCTCATCCACGCATCGCGCAAGAAGCGCATCGCCAAGGGTTCGGGCGCGCAGGTGCAGGACGTCAACAAGCTGCTCAAGCAGCATGCCGACATGCTGAAGATGATGAAACGCGTCAACAAGCTCGGCGACAAGGGACTCATGCGCAGCCTCGGAGGCATGGGAATGCCGCCGGGGGGAATGCCGCCAGGTTTCCCACGCTGA
PROTEIN sequence
Length: 446
MCSTGCGRTALLEADVALPVVRQFIDEVRPKAIGADVIRSVTPGQMVVKIVNDHLIEMLGGTVSDLDLGAVPPVVILMVGLQGSGKTTSSAKIAYRLSQGPQGMAAEMFGGTFATRRRVMMASLDTRRPAAQHQLKVLGEQTGVPTLPIVPLEMPLAITRRALETAKREGFDVLILDTAGRLAIDEELMTEVKQISDLATPKETLLVADAMTGQDAVNVAKAFNERLAVTGIVLTRVDGDARGGAALSMRAVTGRPVKLIGVGEKFDALEPFHPDRIASRILGMGDIVSLVERAAETIEKEDAEKLAAKVRKGQFDMDDLLSQLRQLRKMGGLSGLMGMLPGALQAKAAMSKAKIDEGQLKRQEAIILSMTPKERRNPDLIHASRKKRIAKGSGAQVQDVNKLLKQHADMLKMMKRVNKLGDKGLMRSLGGMGMPPGGMPPGFPR*