ggKbase home page

SCNpilot_expt_300_bf_scaffold_321_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(339..845)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003824AE0 similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 168.0
  • Bit_score: 302
  • Evalue 2.60e-79
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 168.0
  • Bit_score: 310
  • Evalue 1.80e-81
DNA repair protein similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 168.0
  • Bit_score: 304
  • Evalue 2.00e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGTCGCAACTTACTCTTTCCCTCGATTCTTCCCTTCTCGTTCGCGATGTCGCGGGCGACTACCGTCCTGCCAATGCCGACGAGGTGTTGCAGGCTGCGCAGCGTGTGCTCGCAGGGCAGATACGAGGCTGCGAAGCGCTGACCTCGCCGCAGGTGGTGCGCGACTTTCTGCGGGTCAAGCTAGGGACGCTGGAACACGAGGTGTTCGGCGTCATCCACCTGGATGCGCAGAACCGTGTCATCGACTACGTCGAGATGTTCCGGGGCACGGTGAGCCAGACATCGGTGTATCCGCGCGAGGTGGTCAAGGAAGCGTTGGCCAGGAACAGCGCTGCGCTGCTGCTGGTGCACAACCACCCGTCGGGTGCAGCCGAGCCCTCGCGGGCCGACGAGACGCTGACGCAGACGCTGAAATCGGCACTGGCGCTGGTGGACGTGCGGGTGCTGGATCATCTGATCGTCGCCGGTAGCGCCATCCTGTCGTTTGCCGAACGCGGGCTGTTGTAG
PROTEIN sequence
Length: 169
MSQLTLSLDSSLLVRDVAGDYRPANADEVLQAAQRVLAGQIRGCEALTSPQVVRDFLRVKLGTLEHEVFGVIHLDAQNRVIDYVEMFRGTVSQTSVYPREVVKEALARNSAALLLVHNHPSGAAEPSRADETLTQTLKSALALVDVRVLDHLIVAGSAILSFAERGLL*